RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ACTG2P63267 376 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 ZNF85Q03923 595 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 GAGE1Q13065 139 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 PCGF3Q3KNV8 242 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 CLEC12AQ5QGZ9 265 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 FAAP20Q6NZ36 180 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 RPL22L1Q6P5R6 122 aaKnown RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 FCRLAQ7L513 359 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 RANBP3LQ86VV4 465 aaPredicted RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 OR2M7Q8NG81 312 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 ZNF563Q8TA94 476 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 RPS4Y2Q8TD47 263 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 RNF138Q8WVD3 245 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 OIT3Q8WWZ8 545 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 GNRHR2Q96P88 292 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 RPS10P5Q9NQ39 176 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 VDAC3Q9Y277 283 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 KLF13Q9Y2Y9 288 aaPredicted RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 AK6Q9Y3D8 172 aaKnown RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 MED12Q93074 2177 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 C7orf77A4D0Y5 90 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 H7C1Q1 480 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 PIP5K1CO60331 668 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 PPP1R3DO95685 299 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 MBP02144 154 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 SERPINA5P05154 406 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 SRMP19623 302 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 CFPP27918 469 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 GSK3AP49840 483 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 ZNF136P52737 540 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 LSM11P83369 360 aaKnown RBP eCLIP10.09□□□□□ -0.79
CECR3-201ENST00000428828 PMP22Q01453 160 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 TOMM34Q15785 309 aaPredicted RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 NCMAPQ5T1S8 102 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 DHRS11Q6UWP2 260 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 TMEM178AQ8NBL3 297 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 OR10H4Q8NGA5 316 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 OR1J1Q8NGS3 322 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 PPP1R1CQ8WVI7 109 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 SMPDL3BQ92485 455 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 SLC25A36Q96CQ1 311 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 KIRREL1Q96J84 757 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 YPEL4Q96NS1 127 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 DERL3Q96Q80 235 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 MCHR1Q99705 422 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 FAM173AQ9BQD7 235 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 SULT4A1Q9BR01 284 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 POTEKPQ9BYX7 375 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 MEPEQ9NQ76 525 aaPredicted RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 PARP11Q9NR21 331 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 CYTL1Q9NRR1 136 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 OR5V1Q9UGF6 321 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 FAM96BQ9Y3D0 163 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 V9GY05 133 aa10.09□□□□□ -0.79
CECR3-201ENST00000428828 SPENQ96T58 3664 aaKnown RBP10.09□□□□□ -0.79
CECR3-201ENST00000428828 A0A087WUJ7 227 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 TRAV17A0A0B4J275 112 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 FAM166BA8MTA8 275 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 J3QLW9 94 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 SPARCP09486 303 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 LINC00614P0C842 121 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 ZNF19P17023 458 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 PTNP21246 168 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 ACVR1BP36896 505 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 ACAA2P42765 397 aaKnown RBP10.08□□□□□ -0.8
CECR3-201ENST00000428828 PRKXP51817 358 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 UBE2MP61081 183 aaKnown RBP10.08□□□□□ -0.8
CECR3-201ENST00000428828 PLGLB1Q02325 96 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 TAF13Q15543 124 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 POMZP3Q6PJE2 187 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 BTNL8Q6UX41 500 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 MBOAT2Q6ZWT7 520 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 ZNF550Q7Z398 422 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 LRRTM1Q86UE6 522 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 CD163Q86VB7 1156 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 RBMXL3Q8N7X1 1067 aaKnown RBP10.08□□□□□ -0.8
CECR3-201ENST00000428828 UBAC2Q8NBM4 344 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 OR2M3Q8NG83 312 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 GCDHQ92947 438 aaPredicted RBP10.08□□□□□ -0.8
CECR3-201ENST00000428828 FAM46AQ96IP4 442 aaKnown RBP10.08□□□□□ -0.8
CECR3-201ENST00000428828 GFI1Q99684 422 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 RSRP1Q9BUV0 290 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 GPR61Q9BZJ8 451 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 TMEM231Q9H6L2 316 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 ICAM5Q9UMF0 924 aa10.08□□□□□ -0.8
CECR3-201ENST00000428828 BOKQ9UMX3 212 aaPredicted RBP10.08□□□□□ -0.8
CECR3-201ENST00000428828 TVP23AA6NH52 213 aa10.07□□□□□ -0.8
CECR3-201ENST00000428828 LRRC3CA6NJW4 275 aa10.07□□□□□ -0.8
CECR3-201ENST00000428828 SHISA8B8ZZ34 492 aa10.07□□□□□ -0.8
CECR3-201ENST00000428828 KLRC4-KLRK1H3BQV0 150 aa10.07□□□□□ -0.8
CECR3-201ENST00000428828 CH25HO95992 272 aa10.07□□□□□ -0.8
CECR3-201ENST00000428828 RFPL3SP0C7P2 107 aa10.07□□□□□ -0.8
CECR3-201ENST00000428828 RPS2P15880 293 aaKnown RBP10.07□□□□□ -0.8
CECR3-201ENST00000428828 GDF1P27539 372 aa10.07□□□□□ -0.8
CECR3-201ENST00000428828 CD34P28906 385 aa10.07□□□□□ -0.8
CECR3-201ENST00000428828 ZNF41P51814 821 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms