RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 C12orf73Q69YU5 71 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 ZDHHC23Q8IYP9 409 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 ZNF679Q8IYX0 411 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 OR5P3Q8WZ94 311 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 DUX5Q96PT3 197 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 OR8B4Q96RC9 309 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 PCGF1Q9BSM1 259 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 PBOV1Q9GZY1 135 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 SMURF1Q9HCE7 757 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 FAM206AQ9NX38 181 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 GTF2A1LQ9UNN4 478 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 COPS3Q9UNS2 423 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 A0A0U1RQV5 110 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 ZNF816-ZNF321PA0A0X1KG74 233 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 TMEM210A6NLX4 147 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 DVL1O14640 695 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 DCTDP32321 178 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 ACTR3P61158 418 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 ROM1Q03395 351 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 AADACL4Q5VUY2 407 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 FBN3Q75N90 2809 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 THAP5Q7Z6K1 395 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 SLC35F2Q8IXU6 374 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 PNLDC1Q8NA58 520 aaKnown RBP15.3■□□□□ 0.04
GPC1-205ENST00000427506 ST8SIA4Q92187 359 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 RPL3LQ92901 407 aaKnown RBP15.3■□□□□ 0.04
GPC1-205ENST00000427506 FAM71F1Q96KD3 344 aaPredicted RBP15.3■□□□□ 0.04
GPC1-205ENST00000427506 CCL13Q99616 98 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 CIB1Q99828 191 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 TLNRD1Q9H1K6 362 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 DNAJB11Q9UBS4 358 aa15.3■□□□□ 0.04
GPC1-205ENST00000427506 TMEM89A2RUT3 159 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 DNAJC9-AS1A6NH13 148 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 ZNF879B4DU55 563 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 ZNF670-ZNF695F2Z2N8 137 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 TOX4O94842 621 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 PLATP00750 562 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 CXCR4P61073 352 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 WDR38Q5JTN6 314 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 GPR157Q5UAW9 335 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 ZNF322Q6U7Q0 402 aaPredicted RBP15.29■□□□□ 0.04
GPC1-205ENST00000427506 BTN2A1Q7KYR7 527 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 SLC36A1Q7Z2H8 476 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 GID4Q8IVV7 300 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 C3orf56Q8N813 242 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 OR51E1Q8TCB6 317 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 SEH1LQ96EE3 360 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 CENPNQ96H22 339 aaPredicted RBP15.29■□□□□ 0.04
GPC1-205ENST00000427506 ZNF48Q96MX3 618 aaPredicted RBP15.29■□□□□ 0.04
GPC1-205ENST00000427506 MNTQ99583 582 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 GPR84Q9NQS5 396 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 KAAG1Q9UBP8 84 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 OAZ3Q9UMX2 235 aa15.29■□□□□ 0.04
GPC1-205ENST00000427506 PRR32B1ATL7 298 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 SRRM5B3KS81 715 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 ECDO95905 644 aaPredicted RBP15.28■□□□□ 0.04
GPC1-205ENST00000427506 PRTN3P24158 256 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 CFHR2P36980 270 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 GPM6AP51674 278 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 EFNB1P98172 346 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 CEP78Q5JTW2 689 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 METTL11BQ5VVY1 283 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 BRD3OSQ6XYD6 125 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 C9orf139Q6ZV77 190 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 SCCPDHQ8NBX0 429 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 OR10Z1Q8NGY1 313 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 HPSE2Q8WWQ2 592 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 APOL4Q9BPW4 351 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 RIBC2Q9H4K1 309 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 ZMAT3Q9HA38 289 aaKnown RBP15.28■□□□□ 0.04
GPC1-205ENST00000427506 ADGRL4Q9HBW9 690 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 CLN6Q9NWW5 311 aa15.28■□□□□ 0.04
GPC1-205ENST00000427506 SOX21Q9Y651 276 aaPredicted RBP15.28■□□□□ 0.04
GPC1-205ENST00000427506 SAC3D1A6NKF1 404 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 LOC110117498-PIK3R3F6TDL0 507 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 P2RY10O00398 339 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 MAGEB4O15481 346 aaPredicted RBP15.27■□□□□ 0.04
GPC1-205ENST00000427506 AKR7A2O43488 359 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 NDUFB3O43676 98 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 MTRF1O75570 445 aaKnown RBP15.27■□□□□ 0.04
GPC1-205ENST00000427506 SFTPBP07988 381 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 ATP6V1B1P15313 513 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 CFPP27918 469 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 POLR2IP36954 125 aaKnown RBP15.27■□□□□ 0.04
GPC1-205ENST00000427506 COMPP49747 757 aaPredicted RBP15.27■□□□□ 0.04
GPC1-205ENST00000427506 ELF3P78545 371 aaPredicted RBP15.27■□□□□ 0.04
GPC1-205ENST00000427506 MFGE8Q08431 387 aaPredicted RBP15.27■□□□□ 0.04
GPC1-205ENST00000427506 RIPPLY1Q0D2K3 151 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 TUSC1Q2TAM9 212 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 MOB3CQ70IA8 216 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 OR5T2Q8NGG2 359 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 OR51G2Q8NGK0 314 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 ITFG2Q969R8 447 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 ZDHHC16Q969W1 377 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 PPP1R14AQ96A00 147 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 SLC25A28Q96A46 364 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 C12orf43Q96C57 262 aaKnown RBP15.27■□□□□ 0.04
GPC1-205ENST00000427506 WDFY2Q96P53 400 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 SNTG1Q9NSN8 517 aa15.27■□□□□ 0.04
GPC1-205ENST00000427506 HAO2Q9NYQ3 351 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms