RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 MYOCDQ8IZQ8 938 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 GABRG1Q8N1C3 465 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 MMGT1Q8N4V1 131 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 RNF10Q8N5U6 811 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 CSGALNACT2Q8N6G5 542 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 COX18Q8N8Q8 333 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 OR52E2Q8NGJ4 325 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 OR5K2Q8NHB8 316 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF461Q8TAF7 563 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 PIFOQ8TCI5 191 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 C15orf40Q8WUR7 153 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TCEAL3Q969E4 200 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 MRGPRFQ96AM1 343 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 DCPSQ96C86 337 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 FLYWCH2Q96CP2 140 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 GALNT14Q96FL9 552 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 LINC00477Q96M19 166 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 HSD17B10Q99714 261 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SPIN2AQ99865 258 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SPIN2BQ9BPZ2 258 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 TSGA10Q9BZW7 698 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 UCK2Q9BZX2 261 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SLC7A5P2Q9GIP4 190 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 UBE2ZQ9H832 354 aaPredicted RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 MED4Q9NPJ6 270 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 LZTFL1Q9NQ48 299 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 C20orf96Q9NUD7 363 aaPredicted RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 MTCH1Q9NZJ7 389 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SLC17A4Q9Y2C5 497 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF835Q9Y2P0 537 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 SAR1BQ9Y6B6 198 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 A0A0G2JMZ2 1700 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 WDR90Q96KV7 1748 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 PDCD11Q14690 1871 aaKnown RBP1.45□□□□□ -2.18
PTPRC-208ENST00000427110 CITO14578 2027 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 ZSWIM8A7E2V4 1837 aa1.45□□□□□ -2.18
PTPRC-208ENST00000427110 MTCL1Q9Y4B5 1905 aaKnown RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 PLXNA1Q9UIW2 1896 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 LRRC37A2A6NM11 1700 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 IGLV1-36A0A0B4J1U3 117 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 IGKV6-21A0A0C4DH24 114 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 A0A1W2PQ67 120 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 LRCOL1A6NCL2 159 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 NCBP2LA6PVI3 153 aaKnown RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 H7C417 338 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 K7EMT4 169 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 M0R3G1 203 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 SLC9A3R1O14745 358 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 CETN3O15182 167 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 SHOX2O60902 331 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 OR2F2O95006 317 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 HBE1P02100 147 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 APCSP02743 223 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF286BP0CG31 522 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 C1GALT1C1LP0DN25 315 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 MUC1P15941 1255 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 CSNK2A2P19784 350 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 GALP22466 123 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 PMELP40967 661 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 MAGEA1P43355 309 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 HADHBP55084 474 aaKnown RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 RPS23P62266 143 aaKnown RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 SNRPFP62306 86 aaKnown RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 VSNL1P62760 191 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 PITPNAQ00169 270 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 DGCR6Q14129 220 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 PIGHQ14442 188 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 CASP8Q14790 479 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 SPA17Q15506 151 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 COX19Q49B96 90 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 CCDC122Q5T0U0 273 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 SAXO2Q658L1 398 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 TMEM53Q6P2H8 277 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 ZNF880Q6PDB4 577 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 SPESP1Q6UW49 350 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 NTM-AS1Q6ZSK4 140 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 SCD5Q86SK9 330 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 WDR86Q86TI4 376 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 WDFY1Q8IWB7 410 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 CD302Q8IX05 232 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 OFCC1Q8IZS5 231 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 JAGN1Q8N5M9 183 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 OR11H7Q8NGC8 314 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 OR4K5Q8NGD3 323 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 OR10AD1Q8NGE0 317 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 OR9G4Q8NGQ1 327 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 OR8U1Q8NH10 309 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 TSEN15Q8WW01 171 aaKnown RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 RGP1Q92546 391 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 NRGNQ92686 78 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 C8orf44Q96CB5 159 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 L3HYPDHQ96EM0 354 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 ZBED3Q96IU2 234 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 OR10C1Q96KK4 312 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 CCDC42Q96M95 316 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 RNF157Q96PX1 679 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 TIPINQ9BVW5 301 aa1.44□□□□□ -2.18
PTPRC-208ENST00000427110 RSPO3Q9BXY4 272 aaPredicted RBP1.44□□□□□ -2.18
PTPRC-208ENST00000427110 ACTR3CQ9C0K3 210 aaPredicted RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms