RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 A0A0G2JMP0 313 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 A0A0X1KG70 313 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 SNTNA6NMZ2 147 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 SRSF10O75494 262 aaKnown RBP10.62□□□□□ -0.71
GPC1-204ENST00000426280 LHBP01229 141 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 TFF1P04155 84 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 AMY2BP19961 511 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 EPHA1P21709 976 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 VHLP40337 213 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 ROM1Q03395 351 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 PAX8Q06710 450 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 MFGE8Q08431 387 aaPredicted RBP10.62□□□□□ -0.71
GPC1-204ENST00000426280 TIGD6Q17RP2 521 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 TP53I3Q53FA7 332 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 KCTD18Q6PI47 426 aaPredicted RBP10.62□□□□□ -0.71
GPC1-204ENST00000426280 RHOUQ7L0Q8 258 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 ZNF679Q8IYX0 411 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.62□□□□□ -0.71
GPC1-204ENST00000426280 SEMA6DQ8NFY4 1073 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 OR4M2Q8NGB6 313 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 OR52I1Q8NGK6 324 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 ASB17Q8WXJ9 295 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 MNTQ99583 582 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 MROQ9BYG7 248 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 FAM206AQ9NX38 181 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 RNF7Q9UBF6 113 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 RPL36Q9Y3U8 105 aaKnown RBP10.62□□□□□ -0.71
GPC1-204ENST00000426280 COL6A5A8TX70 2615 aa10.62□□□□□ -0.71
GPC1-204ENST00000426280 PPIAL4CA0A0B4J2A2 164 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 DAPL1A0PJW8 107 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 ZNF850A8MQ14 1090 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.61□□□□□ -0.71
GPC1-204ENST00000426280 J3QLI3 93 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 PHYHO14832 338 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 TCF21O43680 179 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 XPNPEP2O43895 674 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 RPP14O95059 124 aaKnown RBP10.61□□□□□ -0.71
GPC1-204ENST00000426280 RPS2P15880 293 aaKnown RBP10.61□□□□□ -0.71
GPC1-204ENST00000426280 PCMT1P22061 227 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 PSMB10P40306 273 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 RIDAP52758 137 aaKnown RBP10.61□□□□□ -0.71
GPC1-204ENST00000426280 PSMA6P60900 246 aaKnown RBP10.61□□□□□ -0.71
GPC1-204ENST00000426280 OR8B8Q15620 311 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 TUSC1Q2TAM9 212 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 ZNF684Q5T5D7 378 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 DEGS2Q6QHC5 323 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 THAP5Q7Z6K1 395 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 LHFPL3Q86UP9 236 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 MUC20Q8N307 709 aaPredicted RBP10.61□□□□□ -0.71
GPC1-204ENST00000426280 YIPF7Q8N8F6 280 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 OR1M1Q8NGA1 313 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 FBLIM1Q8WUP2 373 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 SLC6A7Q99884 636 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 OR10A2Q9H208 303 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 SMURF1Q9HCE7 757 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 ESM1Q9NQ30 184 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 MRPS18AQ9NVS2 196 aaKnown RBP10.61□□□□□ -0.71
GPC1-204ENST00000426280 ZNF69Q9UC07 566 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 PCDHGB5Q9Y5G0 923 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 HSPE1-MOB4S4R3N1 261 aa10.61□□□□□ -0.71
GPC1-204ENST00000426280 TMEM269A0A1B0GVZ9 245 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 C22orf46C9J442 243 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 IFNL4K9M1U5 179 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 ZNF254O75437 659 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 FSTL3O95633 263 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 APOC1P02654 83 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 GYPAP02724 150 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 KRT8P05787 483 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 OR12D2P58182 307 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 EGR3Q06889 387 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 ESCO2Q56NI9 601 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 LIPNQ5VXI9 398 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 WDR25Q64LD2 544 aaPredicted RBP10.6□□□□□ -0.71
GPC1-204ENST00000426280 FAM90A1Q86YD7 464 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 ACBD7Q8N6N7 88 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 BPIFB6Q8NFQ5 453 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 OR11L1Q8NGX0 322 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 HPSE2Q8WWQ2 592 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 PIGCQ92535 297 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 GGHQ92820 318 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 RPL3LQ92901 407 aaKnown RBP10.6□□□□□ -0.71
GPC1-204ENST00000426280 ERGIC1Q969X5 290 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 ITPKCQ96DU7 683 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 NEIL1Q96FI4 390 aaPredicted RBP10.6□□□□□ -0.71
GPC1-204ENST00000426280 ZNF48Q96MX3 618 aaPredicted RBP10.6□□□□□ -0.71
GPC1-204ENST00000426280 ZNF649Q9BS31 505 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 SSBP3Q9BWW4 388 aaPredicted RBP10.6□□□□□ -0.71
GPC1-204ENST00000426280 SLC22A4Q9H015 551 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 NIPAL2Q9H841 368 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 FN3KRPQ9HA64 309 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 FGF20Q9NP95 211 aaPredicted RBP10.6□□□□□ -0.71
GPC1-204ENST00000426280 MIOXQ9UGB7 285 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 AUP1Q9Y679 476 aa10.6□□□□□ -0.71
GPC1-204ENST00000426280 METTL15A6NJ78 407 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 A6NLC8 198 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 LRRC30A6NM36 301 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 ANKRD30BLA7E2S9 258 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 LGALS8O00214 317 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 CDIPTO14735 213 aa10.59□□□□□ -0.71
GPC1-204ENST00000426280 FADS2O95864 444 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms