RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 THBS1P07996 1170 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 TACSTD2P09758 323 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 FOLR2P14207 255 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 GGNBP1Q5YKI7 109 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 ZNF511Q8NB15 262 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 ROBO4Q8WZ75 1007 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 FAM46BQ96A09 425 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 MESP1Q9BRJ9 268 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 CALCBP10092 127 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 TACR3P29371 465 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 SFTPDP35247 375 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 CST11Q9H112 138 aa14.23□□□□□ -0.13
PKP4-205ENST00000426248 MFNGO00587 321 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 GUK1Q16774 197 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 ZNF440Q8IYI8 595 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 OR6N2Q8NGY6 317 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 TMEM234Q8WY98 164 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 NMNAT3Q96T66 252 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 ST6GALNAC2Q9UJ37 374 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 LSM5Q9Y4Y9 91 aaKnown RBP14.22□□□□□ -0.13
PKP4-205ENST00000426248 OR5H15A6NDH6 313 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 OR5H1A6NKK0 313 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 CT45A8P0DMV1 189 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 CT45A9P0DMV2 189 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 CHATP28329 748 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 TRA2AQ13595 282 aaKnown RBP eCLIP14.22□□□□□ -0.137e-7■■□□□ 14
PKP4-205ENST00000426248 Q499Y3 187 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 CT45A2Q5DJT8 189 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 DMRTC1Q5HYR2 192 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 TMPPEQ6ZT21 453 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 SLC39A7Q92504 469 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 LANCL2Q9NS86 450 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 CKLFQ9UBR5 152 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 PIN1P1O15428 100 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 GPRIN2O60269 458 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 OR2T7P0C7T2 308 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 NOVA1P51513 510 aaKnown RBP14.22□□□□□ -0.13
PKP4-205ENST00000426248 NPSR1Q6W5P4 371 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 SLC43A2Q8N370 569 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 OR2T27Q8NH04 317 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 ASB17Q8WXJ9 295 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 SERINC1Q9NRX5 453 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 ABI3Q9P2A4 366 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 TNRC18O15417 2968 aaPredicted RBP14.22□□□□□ -0.13
PKP4-205ENST00000426248 CD74P04233 296 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 HOXA5P20719 270 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 SERPINA2P20848 420 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 NHLH2Q02577 135 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 RNF151Q2KHN1 245 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 RAET1LQ5VY80 246 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 P4HA3Q7Z4N8 544 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 ANKRD37Q7Z713 158 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 Q96M85 177 aa14.22□□□□□ -0.13
PKP4-205ENST00000426248 CD96P40200 585 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 SLC37A1P57057 533 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 CBLN3Q6UW01 205 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 LYG2Q86SG7 212 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 TERB2Q8NHR7 220 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 PHYHIPQ92561 330 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 FAM3DQ96BQ1 224 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 ETV7Q9Y603 341 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 OTOGLQ3ZCN5 2332 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 CREBBPQ92793 2442 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 A0A0A6YYH2 397 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 A6NJ64 397 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 CYCSP99999 105 aaKnown RBP14.21□□□□□ -0.13
PKP4-205ENST00000426248 STPG1Q5TH74 334 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 NUP54Q7Z3B4 507 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 NEK7Q8TDX7 302 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 PBDC1Q9BVG4 233 aa14.21□□□□□ -0.13
PKP4-205ENST00000426248 ZNF106Q9H2Y7 1883 aaKnown RBP14.21□□□□□ -0.14
PKP4-205ENST00000426248 RPL29P47914 159 aaKnown RBP14.21□□□□□ -0.14
PKP4-205ENST00000426248 KHDC3LQ587J8 217 aa14.21□□□□□ -0.14
PKP4-205ENST00000426248 LIPNQ5VXI9 398 aa14.21□□□□□ -0.14
PKP4-205ENST00000426248 SPNS3Q6ZMD2 512 aa14.21□□□□□ -0.14
PKP4-205ENST00000426248 LINC00696Q6ZRV3 163 aa14.21□□□□□ -0.14
PKP4-205ENST00000426248 RPS19BP1Q86WX3 136 aaKnown RBP14.21□□□□□ -0.14
PKP4-205ENST00000426248 SNX22Q96L94 193 aa14.21□□□□□ -0.14
PKP4-205ENST00000426248 TMED7Q9Y3B3 224 aa14.21□□□□□ -0.14
PKP4-205ENST00000426248 A0A087WV48 116 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 C9JQL5 133 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 MASP2O00187 686 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 ADAP1O75689 374 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 MDKP21741 143 aaPredicted RBP14.2□□□□□ -0.14
PKP4-205ENST00000426248 FUT7Q11130 342 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 ABHD17BQ5VST6 288 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 WBP2NLQ6ICG8 309 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 KIRREL2Q6UWL6 708 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 SLC30A7Q8NEW0 376 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 LOXL4Q96JB6 756 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 CHST5Q9GZS9 411 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 METTL9Q9H1A3 318 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 CACFD1Q9UGQ2 172 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 LAMP5Q9UJQ1 280 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 CTAG2O75638 210 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 F13BP05160 661 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 FGF7P21781 194 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 ZNF343Q6P1L6 599 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 PRRT1Q99946 306 aa14.2□□□□□ -0.14
PKP4-205ENST00000426248 MRI1Q9BV20 369 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms