RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 OR8B12Q8NGG6 310 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 MRI1Q9BV20 369 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 ZNF700Q9H0M5 742 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 SMOC1Q9H4F8 434 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 EXOSC3Q9NQT5 275 aaKnown RBP11.83□□□□□ -0.52
USP42-203ENST00000426246 IGHG1P01857 330 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 MGMTP16455 207 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 NAGAP17050 411 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 EXD3Q8N9H8 876 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 AKR7LQ8NHP1 331 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 RNASE11Q8TAA1 199 aaKnown RBP11.82□□□□□ -0.52
USP42-203ENST00000426246 REG4Q9BYZ8 158 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 C14orf166Q9Y224 244 aaKnown RBP11.82□□□□□ -0.52
USP42-203ENST00000426246 A0A0D9SG52 128 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 A0A1W2PQM1 296 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 ABCD4O14678 606 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 GLAP06280 429 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 RPS27AP62979 156 aaKnown RBP11.82□□□□□ -0.52
USP42-203ENST00000426246 UBA52P62987 128 aaKnown RBP11.82□□□□□ -0.52
USP42-203ENST00000426246 SMCO1Q147U7 214 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 PAN3Q58A45 887 aaKnown RBP11.82□□□□□ -0.52
USP42-203ENST00000426246 PUSL1Q8N0Z8 303 aaKnown RBP11.82□□□□□ -0.52
USP42-203ENST00000426246 ZNF501Q96CX3 271 aaPredicted RBP11.82□□□□□ -0.52
USP42-203ENST00000426246 FAAP24Q9BTP7 215 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 ADAM19Q9H013 955 aa11.82□□□□□ -0.52
USP42-203ENST00000426246 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.82□□□□□ -0.526e-7■■■□□ 14.8
USP42-203ENST00000426246 RCL1Q9Y2P8 373 aaKnown RBP11.82□□□□□ -0.52
USP42-203ENST00000426246 PTRH2Q9Y3E5 179 aaKnown RBP11.82□□□□□ -0.52
USP42-203ENST00000426246 BLACEA4D250 179 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 PATE3B3GLJ2 98 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 CAV2P51636 162 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 EMC4Q5J8M3 183 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 TMEM217Q8N7C4 229 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 ZNF2Q9BSG1 426 aaPredicted RBP11.81□□□□□ -0.52
USP42-203ENST00000426246 URM1Q9BTM9 101 aaKnown RBP11.81□□□□□ -0.52
USP42-203ENST00000426246 MAGT1Q9H0U3 335 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 TLNRD1Q9H1K6 362 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 DOCK11Q5JSL3 2073 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 SIGLEC6O43699 453 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 MT-ATP6P00846 226 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 OTX2P32243 289 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 KCNJ3P48549 501 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 ACY1Q03154 408 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 OR2A2Q6IF42 318 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 IQCF2Q8IXL9 164 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 TMEM229BQ8NBD8 167 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 TTC9Q92623 222 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 ZCCHC4Q9H5U6 513 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 ESRP2Q9H6T0 727 aaKnown RBP11.81□□□□□ -0.52
USP42-203ENST00000426246 ABCA1O95477 2261 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 PKDREJQ9NTG1 2253 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 TPT1P13693 172 aaKnown RBP11.81□□□□□ -0.52
USP42-203ENST00000426246 FHITP49789 147 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 OR2B8PP59922 312 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 PPIAP62937 165 aaKnown RBP11.81□□□□□ -0.52
USP42-203ENST00000426246 PDZK1IP1Q13113 114 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 IKZF1Q13422 519 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 MEF2DQ14814 521 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 RSU1Q15404 277 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 SLC25A24Q6NUK1 477 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 CLEC18BQ6UXF7 455 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 MYPOPQ86VE0 399 aaPredicted RBP11.81□□□□□ -0.52
USP42-203ENST00000426246 PIGCQ92535 297 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 ZNF837Q96EG3 531 aaPredicted RBP11.81□□□□□ -0.52
USP42-203ENST00000426246 RRNAD1Q96FB5 475 aaKnown RBP11.81□□□□□ -0.52
USP42-203ENST00000426246 OR10C1Q96KK4 312 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 CNTNAP3BQ96NU0 1288 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 ZNF442Q9H7R0 627 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 G6PC2Q9NQR9 355 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 RARRES3Q9UL19 164 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 NPTNQ9Y639 398 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 PIEZO2Q9H5I5 2752 aa11.81□□□□□ -0.52
USP42-203ENST00000426246 IGKV3D-11A0A0A0MRZ8 115 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 BET1O15155 118 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 BCL2L11O43521 198 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 OR7C1O76099 320 aaPredicted RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 ZNF16P17020 682 aaPredicted RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 JMJD6Q6NYC1 403 aaPredicted RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 KMT5CQ86Y97 462 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 AKR1E2Q96JD6 320 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 GPX7Q96SL4 187 aaPredicted RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 DUSP23Q9BVJ7 150 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 EDARQ9UNE0 448 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 FBXO7Q9Y3I1 522 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 RBM7Q9Y580 266 aaKnown RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 URGCP-MRPS24S4R325 110 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 ARHGAP21Q5T5U3 1957 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 EIF4E2O60573 245 aaKnown RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 MTRF1O75570 445 aaKnown RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 RAD51DO75771 328 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 IGKV3-11P04433 115 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 EPHA1P21709 976 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 MPGP29372 298 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 PNLIPRP2P54317 469 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 RPS18P62269 152 aaKnown RBP11.8□□□□□ -0.52
USP42-203ENST00000426246 BAP18Q8IXM2 172 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 TERB2Q8NHR7 220 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 ARL11Q969Q4 196 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 OR10A2Q9H208 303 aa11.8□□□□□ -0.52
USP42-203ENST00000426246 DKKL1Q9UK85 242 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms