RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZNF17P17021 662 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF43P17038 809 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 GABRR1P24046 479 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 CD27P26842 260 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 RBMXP38159 391 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 P2RY4P51582 365 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 CHAF1BQ13112 559 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 TMEM176BQ3YBM2 270 aaPredicted RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 ACTBL2Q562R1 376 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 AVPI1Q5T686 147 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 AADACL3Q5VUY0 350 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 PEG10Q86TG7 708 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 NAXEQ8NCW5 288 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 SULT4A1Q9BR01 284 aa6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 MRPL13Q9BYD1 178 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 C14orf166Q9Y224 244 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 CARHSP1Q9Y2V2 147 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-202ENST00000425518 SHISA7A6NL88 538 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 E9PLN8 166 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 DUX1O43812 170 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 H2AFB1P0C5Y9 115 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 FCGR2AP12318 317 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 GUCA1AP43080 201 aaPredicted RBP6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 KISS1Q15726 138 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 EIF5AL1Q6IS14 154 aaKnown RBP6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 IL34Q6ZMJ4 242 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 Q7L0L9 218 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 APCDD1LQ8NCL9 501 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 OR10G3Q8NGC4 313 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 PIGTQ969N2 578 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 SLC5A7Q9GZV3 580 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 RCC2Q9P258 522 aaKnown RBP6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 A0A1W2PR77 199 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 K7EPK0 472 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 MFNGO00587 321 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 IGFBP4P22692 258 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 PTGFRP43088 359 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 CAV2P51636 162 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 ACY1Q03154 408 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 PNLIPRP3Q17RR3 467 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 SWI5Q1ZZU3 235 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF529Q6P280 563 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 LRRC18Q8N456 261 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 D2HGDHQ8N465 521 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 FAM71E2Q8N5Q1 922 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 NOXO1Q8NFA2 376 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 GLYATL2Q8WU03 294 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 AKR1E2Q96JD6 320 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 CFAP54Q96N23 3096 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 AQP10Q96PS8 301 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 OCSTAMPQ9BR26 566 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 HDHD3Q9BSH5 251 aaPredicted RBP6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 CRB3Q9BUF7 120 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 LMAN1LQ9HAT1 526 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 KLHL13Q9P2N7 655 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 MEMO1Q9Y316 297 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 WIF1Q9Y5W5 379 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 MEX3AA1L020 520 aaKnown RBP6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 C9JQL5 133 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 IGLV3-19P01714 112 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 PET100P0DJ07 73 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 FOSL2P15408 326 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 CBR1P16152 277 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 FAHP16930 419 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 ADH6P28332 368 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 RPL12P30050 165 aaKnown RBP6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 FCGR2CP31995 323 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 LTBRP36941 435 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 PPT1P50897 306 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 PRSS12P56730 875 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 EIF5AP63241 154 aaKnown RBP6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF528Q3MIS6 628 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 DOK3Q7L591 496 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 C6orf201Q7Z4U5 140 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 POC1AQ8NBT0 407 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 SLC38A9Q8NBW4 561 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 PLPP5Q8NEB5 264 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 ADAMTS17Q8TE56 1095 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 USB1Q9BQ65 265 aaKnown RBP6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF2Q9BSG1 426 aaPredicted RBP6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF160Q9HCG1 818 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 FBLN5Q9UBX5 448 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 PCDHGA1Q9Y5H4 931 aa6.63□□□□□ -1.35
SMARCC1-202ENST00000425518 IGKV1D-8A0A087WSZ0 117 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 A0A1B0GV50 99 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 C10orf142B7Z368 130 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 PGA4P0DJD7 388 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 PGA3P0DJD8 388 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 CLDN17P56750 224 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SMAD4Q13485 552 aaKnown RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SMCO1Q147U7 214 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 SP6Q3SY56 376 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 PRAMEF20Q5VT98 475 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 Q6ZRG5 221 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 C17orf82Q86X59 251 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 OR6S1Q8NH40 331 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 TOMM40LQ969M1 308 aa6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 ZNF775Q96BV0 537 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-202ENST00000425518 C14orf79Q96F83 325 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms