RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 APOBEC1P41238 236 aaKnown RBP12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 CSNK1EP49674 416 aaKnown RBP12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 CSNK2A1P68400 391 aaPredicted RBP12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 SMAD4Q13485 552 aaKnown RBP12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 CSNK2A3Q8NEV1 391 aa12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 KCNG3Q8TAE7 436 aa12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 DDIT4LQ96D03 193 aa12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 BSCL2Q96G97 398 aaPredicted RBP12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 LYZL4Q96KX0 146 aa12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 AQP10Q96PS8 301 aa12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 RPH3AQ9Y2J0 694 aaPredicted RBP12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 PCDHGA1Q9Y5H4 931 aa12.49□□□□□ -0.41
TPM3P9-201ENST00000424846 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 MED6O75586 246 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 HPNP05981 417 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 LYL1P12980 280 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 HOXA1P49639 335 aaPredicted RBP12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 TGIF1Q15583 401 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 ARRDC1Q8N5I2 433 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 OR51T1Q8NGJ9 327 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 OCSTAMPQ9BR26 566 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 SEC11CQ9BY50 192 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 CHRNA10Q9GZZ6 450 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 KLRF1Q9NZS2 232 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 LMO7DNF2Z398 122 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 ZNF708P17019 499 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 SERPINA2P20848 420 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 FPR2P25090 351 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 CD80P33681 288 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 SLC6A9P48067 706 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 GSK3AP49840 483 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 GABREP78334 506 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 CYCSP99999 105 aaKnown RBP12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 C5orf46Q6UWT4 87 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 SPAG16Q8N0X2 631 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 D2HGDHQ8N465 521 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 NFAM1Q8NET5 270 aaPredicted RBP12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 NOXO1Q8NFA2 376 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 OR10G3Q8NGC4 313 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 SSC4DQ8WTU2 575 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 GLYATL2Q8WU03 294 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 ZNF501Q96CX3 271 aaPredicted RBP12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 USB1Q9BQ65 265 aaKnown RBP12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 ALKBH4Q9NXW9 302 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 SFTA3P0C7M3 94 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 HKR1P10072 659 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 OR3A2P47893 321 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 PLPPR5Q32ZL2 321 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 ZNF283Q8N7M2 679 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 OR2AJ1Q8NGZ0 328 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 SMIM8Q96KF7 97 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 C2orf50Q96LR7 162 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 OR5B2Q96R09 309 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 CDC6Q99741 560 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 ZFP57Q9NU63 452 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 MCTS1Q9ULC4 181 aaKnown RBP12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 B3GALT5Q9Y2C3 310 aa12.48□□□□□ -0.41
TPM3P9-201ENST00000424846 TRBV11-1A0A0K0K1C0 115 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 STMND1H3BQB6 276 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 QDPRP09417 244 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 BLVRBP30043 206 aaPredicted RBP12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 PTGDSP41222 190 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 C6orf201Q7Z4U5 140 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 UEVLDQ8IX04 471 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 OR10A2Q9H208 303 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 LIME1Q9H400 295 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 TAF9BQ9HBM6 251 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 NPIPB13A6NJU9 1138 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 DHRS7CA6NNS2 312 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 NPIPB4C9JG80 1138 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 RNASEK-C17orf49H0YIS7 233 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 SNAPINO95295 136 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 OR8U9P0C7N5 309 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 FAHP16930 419 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 CAV2P51636 162 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 GPR85P60893 370 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 KISS1Q15726 138 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 UBE2V2Q15819 145 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 LCN10Q6JVE6 187 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 OGFOD3Q6PK18 319 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 DHRS11Q6UWP2 260 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 Q7L0L9 218 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 ANKRD37Q7Z713 158 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 OR14K1Q8NGZ2 314 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 OR8U1Q8NH10 309 aa12.47□□□□□ -0.41
TPM3P9-201ENST00000424846 SHANK1Q9Y566 2161 aa12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 FOXI3A8MTJ6 420 aaPredicted RBP12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 GLI4P10075 376 aa12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 SLC25A47Q6Q0C1 308 aa12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 TSTD1Q8NFU3 115 aa12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 OR6S1Q8NH40 331 aa12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 PIGTQ969N2 578 aa12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 FBXO17Q96EF6 278 aa12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 NUDT16L1Q9BRJ7 211 aaKnown RBP12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 ZNF701Q9NV72 531 aaPredicted RBP12.46□□□□□ -0.41
TPM3P9-201ENST00000424846 MED19A0JLT2 244 aaPredicted RBP12.46□□□□□ -0.42
TPM3P9-201ENST00000424846 COLCA2A8K830 154 aa12.46□□□□□ -0.42
TPM3P9-201ENST00000424846 SCGNO76038 276 aa12.46□□□□□ -0.42
TPM3P9-201ENST00000424846 FCGR3AP08637 254 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms