RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 GAL3ST1Q99999 423 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 BARHL1Q9BZE3 327 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 SP140LQ9H930 580 aa11.47□□□□□ -0.57
PRPF39-202ENST00000424478 ARID1AO14497 2285 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 ANKRD17O75179 2603 aaKnown RBP11.46□□□□□ -0.57
PRPF39-202ENST00000424478 NOL3O60936 208 aaKnown RBP11.46□□□□□ -0.57
PRPF39-202ENST00000424478 SERPINA3P01011 423 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 SOD3P08294 240 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 HCKP08631 526 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 RAC2P15153 192 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.57
PRPF39-202ENST00000424478 LRRTM1Q86UE6 522 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 PARP16Q8N5Y8 322 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 FAM222BQ8WU58 562 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 MRPL24Q96A35 216 aaKnown RBP11.46□□□□□ -0.57
PRPF39-202ENST00000424478 RGCCQ9H4X1 137 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 GSTK1Q9Y2Q3 226 aa11.46□□□□□ -0.57
PRPF39-202ENST00000424478 CD1AP06126 327 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF250P15622 560 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 FGF9P31371 208 aaPredicted RBP11.46□□□□□ -0.58
PRPF39-202ENST00000424478 TTKP33981 857 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 SERPINF1P36955 418 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 TMBIM6P55061 237 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 EGFL6Q8IUX8 553 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 JAGN1Q8N5M9 183 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 OR1M1Q8NGA1 313 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 UBASH3BQ8TF42 649 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 ZCCHC4Q9H5U6 513 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 UFSP2Q9NUQ7 469 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 LAMP3Q9UQV4 416 aa11.46□□□□□ -0.58
PRPF39-202ENST00000424478 KLF2Q9Y5W3 355 aaPredicted RBP11.46□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF816-ZNF321PA0A0X1KG74 233 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 TIMM50Q3ZCQ8 353 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 PRAMEF6Q5VXH4 476 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 WDR86Q86TI4 376 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 DTX3Q8N9I9 347 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 NUP37Q8NFH4 326 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 OR5D14Q8NGL3 314 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 ADAT1Q9BUB4 502 aaKnown RBP11.45□□□□□ -0.58
PRPF39-202ENST00000424478 CHST5Q9GZS9 411 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 MOV10Q9HCE1 1003 aaKnown RBP11.45□□□□□ -0.58
PRPF39-202ENST00000424478 SMIM31A0A1B0GVY4 71 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 ANKRD30BLA7E2S9 258 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 SPRY1O43609 319 aaPredicted RBP11.45□□□□□ -0.58
PRPF39-202ENST00000424478 ANGPTL7O43827 346 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 GRPP07492 148 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 IGFBP3P17936 291 aaPredicted RBP11.45□□□□□ -0.58
PRPF39-202ENST00000424478 CD53P19397 219 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 MYL9P24844 172 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 CCL8P80075 99 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 PLA2G7Q13093 441 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 MBNL2Q5VZF2 373 aaKnown RBP11.45□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF787Q6DD87 383 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 TMEM200AQ86VY9 491 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 TMEM204Q9BSN7 226 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 FAM192AQ9GZU8 254 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 DAPK2Q9UIK4 370 aa11.45□□□□□ -0.58
PRPF39-202ENST00000424478 GATBO75879 557 aaKnown RBP11.44□□□□□ -0.58
PRPF39-202ENST00000424478 PAHP00439 452 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 AZGP1P25311 298 aaKnown RBP11.44□□□□□ -0.58
PRPF39-202ENST00000424478 DDOSTP39656 456 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 KRTAP10-9P60411 292 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 P2RY14Q15391 338 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 TRAM1Q15629 374 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 MPPED2Q15777 294 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 MST1LQ2TV78 715 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 DDI2Q5TDH0 399 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 OR10K2Q6IF99 312 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 CRIP3Q6Q6R5 217 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF826PQ6ZT77 177 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 C1QL2Q7Z5L3 287 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 CALHM1Q8IU99 346 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 MUC15Q8N387 334 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 DGCR14Q96DF8 476 aaKnown RBP11.44□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF488Q96MN9 340 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 CLEC4MQ9H2X3 399 aaPredicted RBP11.44□□□□□ -0.58
PRPF39-202ENST00000424478 NOTCH2Q04721 2471 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 LOC100289279A0A1B0GTE1 492 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 IQCF6A8MYZ5 107 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 SULT1B1O43704 296 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 ARL6IP5O75915 188 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 COX6B1P14854 86 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 RAB3AP20336 220 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 OR3A4PP47883 348 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 POU3F4P49335 361 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 PPP3R1P63098 170 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 CNPY1Q3B7I2 92 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 CLVS2Q5SYC1 327 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 OR8G5Q8NG78 346 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 OR10K1Q8NGX5 313 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 OR8S1Q8NH09 359 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 ITPKCQ96DU7 683 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 RNF170Q96K19 258 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 CKLFQ9UBR5 152 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 KCNN3Q9UGI6 736 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 ANXA2P2A6NMY6 339 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF732B4DXR9 585 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 IGHV3-13P01766 116 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 MAPK3P27361 379 aaPredicted RBP11.44□□□□□ -0.58
PRPF39-202ENST00000424478 OR8G1Q15617 311 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms