RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 SYT14Q8NB59 555 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OR4F15Q8NGB8 312 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OR10G2Q8NGC3 310 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 Q96M85 177 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ERMAPQ96PL5 475 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SLC38A2Q96QD8 506 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 TSPAN32Q96QS1 320 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FOXC2Q99958 501 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 DHRS9Q9BPW9 319 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 KCNS3Q9BQ31 491 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 KATNB1Q9BVA0 655 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OR52D1Q9H346 318 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 LIME1Q9H400 295 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 C1orf198Q9H425 327 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ARMC1Q9NVT9 282 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 IL20Q9NYY1 176 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 NPAP1Q9NZP6 1156 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 IER3IP1Q9Y5U9 82 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CDH10Q9Y6N8 788 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 PRRC2CQ9Y520 2896 aaKnown RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 IGHV1-18A0A0C4DH31 117 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 C12orf71A8MTZ7 269 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 E7EQL1 145 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 TMEM178BH3BS89 294 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 E2F6O75461 281 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 RAB36O95755 333 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 RENP00797 406 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 HLA-HP01893 362 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SERPINA5P05154 406 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CST2P09228 141 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CECR9P0C854 216 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 DANCRP0C864 163 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CD79AP11912 226 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 B4GALT1P15291 398 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 PAX1P15863 534 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 LAP3P28838 519 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CRABP1P29762 137 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 IDH3GP51553 393 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FXYD6P3P58550 94 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 PCBD1P61457 104 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 MYBPC1Q00872 1141 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 NAAAQ02083 359 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 KRR1Q13601 381 aaKnown RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 DEFB113Q30KQ7 82 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SLC36A3Q495N2 470 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 AGAP6Q5VW22 663 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 KRT80Q6KB66 452 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 DNM1P34Q6PK57 102 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF620Q6ZNG0 422 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 Q75L30 129 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SLC16A14Q7RTX9 510 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 MDP1Q86V88 176 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 NKAIN3Q8N8D7 197 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 AQP11Q8NBQ7 271 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SLC24A4Q8NFF2 622 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 TSPAN14Q8NG11 270 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OR52L1Q8NGH7 329 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 OR5K1Q8NHB7 308 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FANK1Q8TC84 345 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SMAP2Q8WU79 429 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 DNAJC9Q8WXX5 260 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 NSMAFQ92636 917 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 NRGNQ92686 78 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SLCO4A1Q96BD0 722 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SAMD8Q96LT4 415 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF75AQ96N20 296 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FEVQ99581 238 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 TSSK6Q9BXA6 273 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CXXC4Q9H2H0 198 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 RNF121Q9H920 327 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 NTN4Q9HB63 628 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FAIMQ9NVQ4 179 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 PDP1Q9P0J1 537 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 MDFICQ9P1T7 246 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 POU2F3Q9UKI9 436 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 MOKQ9UQ07 419 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 PLEKHA6Q9Y2H5 1048 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 UGT2A1Q9Y4X1 527 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 AP4S1Q9Y587 144 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 TIMM10BQ9Y5J6 103 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FREM1Q5H8C1 2179 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ALPK2Q86TB3 2170 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 IGKV1D-43A0A0B4J1Z2 117 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 IGHV2OR16-5A0A0B4J2B6 119 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 IQCMA0A1B0GVH7 501 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ATP6V1G2-DDX39BF2Z307 99 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 J3QR06 171 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SLC16A7O60669 478 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SMPD2O60906 423 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 SLC2A10O95528 541 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 CD8AP01732 235 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 HMGN1P05114 100 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 MMP7P09237 267 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 COX5BP10606 129 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF35P13682 527 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 ZNF14P17017 642 aaPredicted RBP2.11□□□□□ -2.07
VPS13A-208ENST00000423463 MSR1P21757 451 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 TUBG1P23258 451 aa2.11□□□□□ -2.07
VPS13A-208ENST00000423463 FASP25445 335 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms