RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CBLN2Q8IUK8 224 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 CCDC36Q8IYA8 594 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 OR4A4PQ8NGN8 299 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 STOML3Q8TAV4 291 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 PIGTQ969N2 578 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 PGAM5Q96HS1 289 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 OXGR1Q96P68 337 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 SPSB2Q99619 263 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 ACKR4Q9NPB9 350 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 FSCN3Q9NQT6 498 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 ANAPC10Q9UM13 185 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 IGKV1D-8A0A087WSZ0 117 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 TRBV6-7A0A0A0MS04 114 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 A0A1W2PQM1 296 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 ZFAND5O76080 213 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 S100A10P60903 97 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 DCDP81605 110 aaKnown RBP13.88□□□□□ -0.19
CDH1-202ENST00000422392 SHBQ15464 509 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 LDLRAD3Q86YD5 345 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 OR5L2Q8NGL0 311 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 SSC4DQ8WTU2 575 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 OCSTAMPQ9BR26 566 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 PISDQ9UG56 409 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 G3V3Y1 287 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 HPNP05981 417 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 DBHP09172 617 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 MSX1P28360 303 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 PTGFRP43088 359 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 UBE2V2Q15819 145 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 PNLDC1Q8NA58 520 aaKnown RBP13.88□□□□□ -0.19
CDH1-202ENST00000422392 SLC30A7Q8NEW0 376 aa13.88□□□□□ -0.19
CDH1-202ENST00000422392 URM1Q9BTM9 101 aaKnown RBP13.88□□□□□ -0.19
CDH1-202ENST00000422392 ZNF701Q9NV72 531 aaPredicted RBP13.88□□□□□ -0.19
CDH1-202ENST00000422392 CCL1P22362 96 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 FPR2P25090 351 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 HIST3H3Q16695 136 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 PABPC1L2AQ5JQF8 200 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 LHFPL1Q86WI0 220 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 ZNF775Q96BV0 537 aaPredicted RBP13.87□□□□□ -0.19
CDH1-202ENST00000422392 SPACA9Q96E40 222 aaPredicted RBP13.87□□□□□ -0.19
CDH1-202ENST00000422392 CDC6Q99741 560 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 HDHD3Q9BSH5 251 aaPredicted RBP13.87□□□□□ -0.19
CDH1-202ENST00000422392 TLNRD1Q9H1K6 362 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 CHRDQ9H2X0 955 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 ZNF160Q9HCG1 818 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 RAB19A4D1S5 217 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 ZNF705EA8MWA4 302 aaPredicted RBP13.87□□□□□ -0.19
CDH1-202ENST00000422392 F8W036 122 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 FAM157CP0CG43 387 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 BLOC1S1P78537 153 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 CYCSP99999 105 aaKnown RBP13.87□□□□□ -0.19
CDH1-202ENST00000422392 PEG10Q86TG7 708 aaKnown RBP13.87□□□□□ -0.19
CDH1-202ENST00000422392 RNF141Q8WVD5 230 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 ZNF385AQ96PM9 386 aaKnown RBP13.87□□□□□ -0.19
CDH1-202ENST00000422392 DEFB126Q9BYW3 111 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 RAB18Q9NP72 206 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 PURGQ9UJV8 347 aaKnown RBP13.87□□□□□ -0.19
CDH1-202ENST00000422392 OSGIN2Q9Y236 505 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 FAM96BQ9Y3D0 163 aa13.87□□□□□ -0.19
CDH1-202ENST00000422392 AQP7P3A6NL99 342 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 ZNF205O95201 554 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 SFTPBP07988 381 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 CD79AP11912 226 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 FCGR2AP12318 317 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 RPS2P15880 293 aaKnown RBP13.86□□□□□ -0.19
CDH1-202ENST00000422392 CCL7P80098 99 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 PRSS54Q6PEW0 395 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 UQCC3Q6UW78 93 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 C6orf201Q7Z4U5 140 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 ESX1Q8N693 406 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 CPNE2Q96FN4 548 aaPredicted RBP13.86□□□□□ -0.19
CDH1-202ENST00000422392 UCN2Q96RP3 112 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 PECRQ9BY49 303 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 HRH4Q9H3N8 390 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 SAV1Q9H4B6 383 aaPredicted RBP13.86□□□□□ -0.19
CDH1-202ENST00000422392 TREM1Q9NP99 234 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 TMEM100Q9NV29 134 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 HPF1Q9NWY4 346 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 RARRES3Q9UL19 164 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 B3GALT1Q9Y5Z6 326 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 IGLV3-32A0A0A0MS00 114 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 CEACAM18A8MTB9 384 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 RCC1P18754 421 aaPredicted RBP13.86□□□□□ -0.19
CDH1-202ENST00000422392 IL32P24001 234 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 GABRR1P24046 479 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 ACY1Q03154 408 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 COL19A1Q14993 1142 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 PNLIPRP3Q17RR3 467 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 GNRHR2Q96P88 292 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 PHF7Q9BWX1 381 aaPredicted RBP13.86□□□□□ -0.19
CDH1-202ENST00000422392 ZNF581Q9P0T4 197 aa13.86□□□□□ -0.19
CDH1-202ENST00000422392 PMS2P1A4D2B8 440 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 MST1LQ2TV78 715 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 ACTBL2Q562R1 376 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 ZNF385CQ66K41 422 aaPredicted RBP13.85□□□□□ -0.19
CDH1-202ENST00000422392 SVBPQ8N300 66 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 FAM89BQ8N5H3 189 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 ADPRHL1Q8NDY3 354 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 SLC22A8Q8TCC7 542 aa13.85□□□□□ -0.19
CDH1-202ENST00000422392 ARL11Q969Q4 196 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms