RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 DUX4L4P0CJ87 422 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 DUX4L5P0CJ88 424 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 DUX4L6P0CJ89 424 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 DUX4L7P0CJ90 424 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 POU1F1P28069 291 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 ARF6P62330 175 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 POU4F2Q12837 409 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 PRDX4Q13162 271 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 LRRC10Q5BKY1 277 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 SLC35D3Q5M8T2 416 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 OLFML2AQ68BL7 652 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 STUMQ69YW2 141 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 DUX4L9Q6RFH8 374 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 METAP1DQ6UB28 335 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 VMO1Q7Z5L0 202 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 AQP12AQ8IXF9 295 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 LY6G5BQ8NDX9 201 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 TEX12Q9BXU0 123 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 DNTTIP1Q9H147 329 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 C1orf21Q9H246 121 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 C1RLQ9NZP8 487 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 PDP1Q9P0J1 537 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 ZNF319Q9P2F9 582 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 ONECUT1Q9UBC0 465 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 DNAJB11Q9UBS4 358 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 DUX4Q9UBX2 424 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 CAB39Q9Y376 341 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 TRRAPQ9Y4A5 3859 aa9.53□□□□□ -0.88
SQSTM1-203ENST00000422245 A0A0U1RQK1 487 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 CLPSL1A2RUU4 121 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 OSMP13725 252 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 ACKR3P25106 362 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 RPS7P62081 194 aaKnown RBP9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 RELBQ01201 579 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 IKZF1Q13422 519 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 GINS1Q14691 196 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 OCLNQ16625 522 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 ATPAF1Q5TC12 328 aaPredicted RBP9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 ZDHHC23Q8IYP9 409 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 PAPD5Q8NDF8 572 aaKnown RBP9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 C8orf46Q8TAG6 207 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 FAM81AQ8TBF8 368 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 NPRL2Q8WTW4 380 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 THEM6Q8WUY1 208 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 LRTOMTQ8WZ04 291 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 OR5P3Q8WZ94 311 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 ITFG2Q969R8 447 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 CLPTM1LQ96KA5 538 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 RAB3IPQ96QF0 476 aaPredicted RBP9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 PKP2Q99959 881 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 DCTN5Q9BTE1 182 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 DPAGT1Q9H3H5 408 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 YY1AP1Q9H869 796 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 HAO2Q9NYQ3 351 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 FAM96BQ9Y3D0 163 aa9.52□□□□□ -0.89
SQSTM1-203ENST00000422245 ZNF816-ZNF321PA0A0X1KG74 233 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 BTBD17A6NE02 478 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 ZNF850A8MQ14 1090 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 GPR137BO60478 399 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 IGHV4-59P01825 116 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 FBP1P09467 338 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 T-ENOLP0DO92 83 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 ANXA8P13928 327 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 EEF1B2P24534 225 aaKnown RBP9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 IER3P46695 156 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 TGM4P49221 684 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 ELF3P78545 371 aaPredicted RBP9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 FAM76BQ5HYJ3 339 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 BRICD5Q6PL45 260 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 GDPGP1Q6ZNW5 385 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 KCTD8Q6ZWB6 473 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 CPOQ8IVL8 374 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 FGFRL1Q8N441 504 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 PIP4P2Q8N4L2 257 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 OR8B12Q8NGG6 310 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 CANT1Q8WVQ1 401 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 HPSE2Q8WWQ2 592 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 DNAJC9Q8WXX5 260 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 RPL3LQ92901 407 aaKnown RBP9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 SEH1LQ96EE3 360 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 HIST1H2AAQ96QV6 131 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 THTPAQ9BU02 230 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 PPP1R3EQ9H7J1 279 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 SLC25A19Q9HC21 320 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 TAS2R1Q9NYW7 299 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 LAMP5Q9UJQ1 280 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 KLHDC2Q9Y2U9 406 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 LRP12Q9Y561 859 aa9.51□□□□□ -0.89
SQSTM1-203ENST00000422245 A0A0U1RQV5 110 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 ACOD1A6NK06 481 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 M0QZ24 198 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 SIGLEC5O15389 551 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 KCNAB3O43448 404 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 SELLP14151 372 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 ALOX5APP20292 161 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 SLC2A5P22732 501 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 CAV3P56539 151 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 GMFBP60983 142 aa9.5□□□□□ -0.89
SQSTM1-203ENST00000422245 CDK5Q00535 292 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms