RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 MARVELD3Q96A59 401 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 VSIG4Q9Y279 399 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 ASPMQ8IZT6 3477 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 LRRC3CA6NJW4 275 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 EEF1E1-BLOC1S5C9J1V9 151 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 SULT1C2O00338 296 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 TNFSF15O95150 251 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 CRYZL1O95825 349 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 IGHEP01854 428 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 CCL2P13500 99 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 CD34P28906 385 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 MECP2P51608 486 aaKnown RBP9.6□□□□□ -0.87
DDX56-203ENST00000421223 MTCP1P56278 107 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 LSM6P62312 80 aaKnown RBP9.6□□□□□ -0.87
DDX56-203ENST00000421223 DHRS2Q13268 280 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 RSPO1Q2MKA7 263 aaPredicted RBP9.6□□□□□ -0.87
DDX56-203ENST00000421223 SLC16A14Q7RTX9 510 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 OR2V1Q8NHB1 315 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 COQ8AQ8NI60 647 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 FGFBP3Q8TAT2 258 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 AQP3Q92482 292 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 NABP1Q96AH0 204 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 OPN4Q9UHM6 478 aa9.6□□□□□ -0.87
DDX56-203ENST00000421223 CACNA1GO43497 2377 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 RPS10-NUDT3A0A1W2PQS6 291 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 SHOXO15266 292 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 HPP00738 406 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 IFNA7P01567 189 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 ITGB2P05107 769 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 CYC1P08574 325 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 CPN1P15169 458 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 PTGFRP43088 359 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 OR3A2P47893 321 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 B3GALT5-AS1P59052 145 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 IL13RA1P78552 427 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 TGIF1Q15583 401 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 C20orf196Q8IYI0 205 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 SPICQ8N5J4 248 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 ADAD2Q8NCV1 583 aaKnown RBP9.59□□□□□ -0.87
DDX56-203ENST00000421223 PSMF1Q92530 271 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 TMEM54Q969K7 222 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 POM121Q96HA1 1249 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 URM1Q9BTM9 101 aaKnown RBP9.59□□□□□ -0.87
DDX56-203ENST00000421223 CST11Q9H112 138 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 SLC6A15Q9H2J7 730 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 SH2D2AQ9NP31 389 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 EDARQ9UNE0 448 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 OR2AT4A6NND4 320 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 KCNAB3O43448 404 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 SSX5O60225 188 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 RAD51DO75771 328 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 ZNF205O95201 554 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 ZNF735P0CB33 412 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 MGMTP16455 207 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 AMY2BP19961 511 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 RAB6AP20340 208 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 SNU13P55769 128 aaKnown RBP9.59□□□□□ -0.87
DDX56-203ENST00000421223 TMEM50BP56557 158 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 PPP1R1AQ13522 171 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 GGNQ86UU5 652 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 LYPD6Q86Y78 171 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 NAXDQ8IW45 347 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 CCDC28AQ8IWP9 274 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 ST8SIA4Q92187 359 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 SGK3Q96BR1 496 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 SLC25A21Q9BQT8 299 aaPredicted RBP9.59□□□□□ -0.87
DDX56-203ENST00000421223 OR10A2Q9H208 303 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 SLCO5A1Q9H2Y9 848 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 UBQLN2Q9UHD9 624 aa9.59□□□□□ -0.87
DDX56-203ENST00000421223 LOC102725191A0A1B0GVB3 256 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 C5orf51A6NDU8 294 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 TMEM14DPA8MWL7 114 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 DHRS3O75911 302 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 SPDEFO95238 335 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 MT-CO3P00414 261 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 MAGEA5P43359 124 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 QRFPP83859 136 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 TOR2AQ5JU69 321 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 VASH2Q86V25 355 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 PRRT1Q99946 306 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 C1QTNF6Q9BXI9 259 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 OR51B6Q9H340 312 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 FAM221AA4D161 298 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 MCRIP1C9JLW8 97 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 I3L521 148 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 CD59P13987 128 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 ACKR3P25106 362 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 CASRP41180 1078 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 GMFBP60983 142 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 SEC61A1P61619 476 aaKnown RBP9.58□□□□□ -0.88
DDX56-203ENST00000421223 DHODHQ02127 395 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 SPEM2Q0P670 501 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 SLC9A3R2Q15599 337 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 TAF9Q16594 264 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 C6orf201Q7Z4U5 140 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 CSNK2A3Q8NEV1 391 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 REEP6Q96HR9 211 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 FOXB1Q99853 325 aa9.58□□□□□ -0.88
DDX56-203ENST00000421223 KCNN3Q9UGI6 736 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms