RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 CHRNB4P30926 498 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 TNFSF8P32971 234 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 WNT5AP41221 380 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF83P51522 516 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ART1P52961 327 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 CLDN12P56749 244 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 MRPS10P82664 201 aaKnown RBP5.15□□□□□ -1.59
HMGB3-202ENST00000419110 FAM3AP98173 230 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 PITPNAQ00169 270 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF92Q03936 586 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 SNTB2Q13425 540 aaKnown RBP5.15□□□□□ -1.59
HMGB3-202ENST00000419110 GK2Q14410 553 aaPredicted RBP5.15□□□□□ -1.59
HMGB3-202ENST00000419110 RGS21Q2M5E4 152 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 PYDC2Q56P42 97 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 C1orf100Q5SVJ3 147 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM69Q5SWH9 247 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ASPHD2Q6ICH7 369 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 PYHIN1Q6K0P9 492 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF529Q6P280 563 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 XKRXQ6PP77 449 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF474Q6S9Z5 364 aaPredicted RBP5.15□□□□□ -1.59
HMGB3-202ENST00000419110 OR2W3Q7Z3T1 314 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 MYPOPQ86VE0 399 aaPredicted RBP5.15□□□□□ -1.59
HMGB3-202ENST00000419110 LIX1LQ8IVB5 337 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF101Q8IZC7 436 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 OR5AS1Q8N127 324 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 OR8H2Q8N162 312 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 PAQR4Q8N4S7 273 aaPredicted RBP5.15□□□□□ -1.59
HMGB3-202ENST00000419110 GDPD1Q8N9F7 314 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 WDR31Q8NA23 367 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 OR4M1Q8NGD0 313 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 SYNPRQ8TBG9 265 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 TNFAIP8L1Q8WVP5 186 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 FAM3DQ96BQ1 224 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 SGK3Q96BR1 496 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 SLC25A38Q96DW6 304 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ADAT1Q9BUB4 502 aaKnown RBP5.15□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM59Q9BXS4 323 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 BCL2L14Q9BZR8 327 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 SRRQ9GZT4 340 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 NGBQ9NPG2 151 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 TUBG2Q9NRH3 451 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 ABCB10Q9NRK6 738 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 GPR173Q9NS66 373 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 CYSLTR2Q9NS75 346 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 OSGIN2Q9Y236 505 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 MRPS28Q9Y2Q9 187 aaKnown RBP5.15□□□□□ -1.59
HMGB3-202ENST00000419110 SPEF1Q9Y4P9 236 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 SLC25A15Q9Y619 301 aa5.15□□□□□ -1.59
HMGB3-202ENST00000419110 PRR14LQ5THK1 2151 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 A0A0A6YYH2 397 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 IGHV2OR16-5A0A0B4J2B6 119 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 IGHV1-18A0A0C4DH31 117 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.14□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM272A0A1B0GTI8 110 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 A0A1B0GUH1 482 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 ISPDA4D126 451 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 METTL21EPA6NDL7 271 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 A6NIN4 97 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 A6NJ64 397 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 OR5B21A6NL26 309 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 CD300LBA8K4G0 201 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 A8MXE2 369 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 C16orf97H3BN30 126 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 TIMM8AO60220 97 aaPredicted RBP5.14□□□□□ -1.59
HMGB3-202ENST00000419110 AGFG2O95081 481 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 CYB5AP00167 134 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 NRASP01111 189 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 CRYAAP02489 173 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 PRF1P14222 555 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 RAC2P15153 192 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 ELK1P19419 428 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 RAB6AP20340 208 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 GCH1P30793 250 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 RAD52P43351 418 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 PITPNBP48739 271 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 RBP2P50120 134 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 ATP1B3P54709 279 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 NAAAQ02083 359 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 PRDX4Q13162 271 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 TAB1Q15750 504 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF79Q15937 498 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 ST3GAL2Q16842 350 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 RSPO1Q2MKA7 263 aaPredicted RBP5.14□□□□□ -1.59
HMGB3-202ENST00000419110 OXLD1Q5BKU9 147 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 SPATA46Q5T0L3 261 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 HACD4Q5VWC8 232 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM42Q69YG0 159 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 RAB12Q6IQ22 244 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 FBXW12Q6X9E4 464 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 NCCRP1Q6ZVX7 275 aaPredicted RBP5.14□□□□□ -1.59
HMGB3-202ENST00000419110 NAA40Q86UY6 237 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 Q8N402 240 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 MINDY2Q8NBR6 621 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 BHLHE23Q8NDY6 225 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 OR51D1Q8NGF3 324 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 OR52N4Q8NGI2 321 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 OR1J1Q8NGS3 322 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 OR5H6Q8NGV6 325 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 SETD6Q8TBK2 473 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms