RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.68■□□□□ 0.1
PTCD3-204ENST00000418628 OR4C45A6NMZ5 311 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 XPNPEP2O43895 674 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 MTRF1O75570 445 aaKnown RBP15.68■□□□□ 0.1
PTCD3-204ENST00000418628 FAHP16930 419 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 ETV1P50549 477 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 MVKQ03426 396 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 MZT1Q08AG7 82 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 RIPPLY1Q0D2K3 151 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 MRPL28Q13084 256 aaKnown RBP15.68■□□□□ 0.1
PTCD3-204ENST00000418628 ZNF154Q13106 437 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 CCDC54Q8NEL0 328 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 RAB1CQ92928 201 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 TIMD4Q96H15 378 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 C14orf119Q9NWQ9 140 aa15.68■□□□□ 0.1
PTCD3-204ENST00000418628 IGHV3-64DA0A0J9YX35 117 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 LOC107986453A0A1B0GWG9 222 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 EFCAB10A6NFE3 127 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 ZNF850A8MQ14 1090 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 J3QLW9 94 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 IGHV2-5P01817 119 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 HTR1AP08908 422 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 ZNF19P17023 458 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 THBS2P35442 1172 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 GNALP38405 381 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 HSPA13P48723 471 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 TGM4P49221 684 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 GZMKP49863 264 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 BTG1P62324 171 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 ZMYND11Q15326 602 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 TMEM155Q4W5P6 130 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 COMMD2Q86X83 199 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 ZDHHC23Q8IYP9 409 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 OR1M1Q8NGA1 313 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 OR8S1Q8NH09 359 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 HAVCR2Q8TDQ0 301 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 ENPP5Q9UJA9 477 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 PIGLQ9Y2B2 252 aa15.67■□□□□ 0.1
PTCD3-204ENST00000418628 CAB39Q9Y376 341 aaPredicted RBP15.67■□□□□ 0.1
PTCD3-204ENST00000418628 EXOSC1Q9Y3B2 195 aaKnown RBP15.67■□□□□ 0.1
PTCD3-204ENST00000418628 TMEM210A6NLX4 147 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 ANXA2P2A6NMY6 339 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 E9PI62 339 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 SLC1A7O00341 560 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 CYB5R3P00387 301 aaPredicted RBP15.66■□□□□ 0.1
PTCD3-204ENST00000418628 VHLP40337 213 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 CDH15P55291 814 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 ST3GAL4Q11206 333 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 ALKBH1Q13686 389 aaKnown RBP15.66■□□□□ 0.1
PTCD3-204ENST00000418628 LRRC28Q86X40 367 aaPredicted RBP15.66■□□□□ 0.1
PTCD3-204ENST00000418628 MSI2Q96DH6 328 aaKnown RBP15.66■□□□□ 0.1
PTCD3-204ENST00000418628 TMEM80Q96HE8 168 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 RTL8AQ9BWD3 113 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 FN3KRPQ9HA64 309 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 UFSP2Q9NUQ7 469 aa15.66■□□□□ 0.1
PTCD3-204ENST00000418628 A0A1B0GVI7 797 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 FAM157AC9JC47 383 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 F5H0A9 414 aaPredicted RBP15.65■□□□□ 0.1
PTCD3-204ENST00000418628 SYT7O43581 403 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 LHBP01229 141 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 ZNF16P17020 682 aaPredicted RBP15.65■□□□□ 0.1
PTCD3-204ENST00000418628 CFHR2P36980 270 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 MDH2P40926 338 aaKnown RBP15.65■□□□□ 0.1
PTCD3-204ENST00000418628 ODF4Q2M2E3 257 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 CEACAM21Q3KPI0 293 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 C6orf141Q5SZD1 244 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 TMEM244Q5VVB8 128 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 WDR82Q6UXN9 313 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 PEG10Q86TG7 708 aaKnown RBP15.65■□□□□ 0.1
PTCD3-204ENST00000418628 C1orf87Q8N0U7 546 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 GCSAMQ8N6F7 178 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 OR52N1Q8NH53 320 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 PIGCQ92535 297 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 C10orf35Q96D05 121 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 MICU1Q9BPX6 476 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 NARFLQ9H6Q4 476 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 ZNF665Q9H7R5 613 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 CLEC2DQ9UHP7 191 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 SVEP1Q4LDE5 3571 aa15.65■□□□□ 0.1
PTCD3-204ENST00000418628 OR5B21A6NL26 309 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 LRRC30A6NM36 301 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 LMX1BO60663 402 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 CSNK2BP67870 215 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 DOC2BQ14184 412 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 ZNF404Q494X3 552 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 CLVS2Q5SYC1 327 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 OR2G6Q5TZ20 316 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 RNLSQ5VYX0 342 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 XAF1Q6GPH4 301 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 ZNF826PQ6ZT77 177 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 AHSA2Q719I0 299 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 RDH10Q8IZV5 341 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 BPIFB6Q8NFQ5 453 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 OR11L1Q8NGX0 322 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 OR10AC1Q8NH08 325 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 CHST5Q9GZS9 411 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 PAK1IP1Q9NWT1 392 aaPredicted RBP15.64■□□□□ 0.09
PTCD3-204ENST00000418628 RNF7Q9UBF6 113 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 RAB26Q9ULW5 256 aa15.64■□□□□ 0.09
PTCD3-204ENST00000418628 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms