RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ZNF420Q8TAQ5 688 aaPredicted RBP19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 UFSP2Q9NUQ7 469 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 RAB26Q9ULW5 256 aa19.48■□□□□ 0.71
SMARCB1-205ENST00000417137 VPS13CQ709C8 3753 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 LRP5LA4QPB2 252 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 LY6G6DO95868 133 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 FAHP16930 419 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 KIR3DL2P43630 455 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 GZMKP49863 264 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 ALKBH1Q13686 389 aaKnown RBP19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 PRAMEF6Q5VXH4 476 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 CYB5R2Q6BCY4 276 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 OR5P3Q8WZ94 311 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 RNF166Q96A37 237 aaPredicted RBP19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 ITPKCQ96DU7 683 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 RNF170Q96K19 258 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 SMR3AQ99954 134 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 PLEKHA1Q9HB21 404 aa19.47■□□□□ 0.71
SMARCB1-205ENST00000417137 CHD3Q12873 2000 aaKnown RBP19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 ISPDA4D126 451 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 A6NLC8 198 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 TMEM210A6NLX4 147 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 NRASP01111 189 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 ISG15P05161 165 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 CCDC159P0C7I6 412 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 TGM4P49221 684 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 MPPED2Q15777 294 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 CEACAM21Q3KPI0 293 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 CLVS2Q5SYC1 327 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 MOB3CQ70IA8 216 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 AHSA2Q719I0 299 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 ZNF676Q8N7Q3 588 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 CLDND2Q8NHS1 167 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 C10orf35Q96D05 121 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 GSX1Q9H4S2 264 aaPredicted RBP19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 NARFLQ9H6Q4 476 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 RNF7Q9UBF6 113 aa19.46■□□□□ 0.71
SMARCB1-205ENST00000417137 LOC107986453A0A1B0GWG9 222 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 PMELP40967 661 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 NANOS3P60323 173 aaKnown RBP19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 BTG1P62324 171 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 CCDC58Q4VC31 144 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 KCTD8Q6ZWB6 473 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 OR1M1Q8NGA1 313 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 OR5A2Q8NGI9 324 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 OR52N1Q8NH53 320 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 MYDGFQ969H8 173 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 GAL3ST1Q99999 423 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 COMMD4Q9H0A8 199 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 Q9H521 79 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 PPP1R3EQ9H7J1 279 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 C1orf123Q9NWV4 160 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 DCAF16Q9NXF7 216 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 BABAM2Q9NXR7 383 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 TPRKBQ9Y3C4 175 aa19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 FLNAP21333 2647 aaKnown RBP19.45■□□□□ 0.7
SMARCB1-205ENST00000417137 TMEM212A6NML5 194 aa19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 FSTL3O95633 263 aa19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 CYB5R3P00387 301 aaPredicted RBP19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 SERPINA3P01011 423 aa19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 IGHV2-70P01814 119 aa19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 PLCXD3Q63HM9 321 aa19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 LRRC28Q86X40 367 aaPredicted RBP19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 RDH10Q8IZV5 341 aa19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 MUC20Q8N307 709 aaPredicted RBP19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 SPICQ8N5J4 248 aa19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 RAB39BQ96DA2 213 aa19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 HHLA2Q9UM44 414 aa19.44■□□□□ 0.7
SMARCB1-205ENST00000417137 PPIAL4EA0A075B759 164 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 TRBV2A0A0J9YWF9 115 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 OR5B21A6NL26 309 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 OR4C45A6NMZ5 311 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 PTGES3LE9PB15 166 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 PPIAL4DF5H284 164 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 SLC1A7O00341 560 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 WNT9BO14905 357 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 CD5LO43866 347 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 PPIAL4FP0DN26 164 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 IGHV4-31P0DP07 118 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 MDH2P40926 338 aaKnown RBP19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 GNG3P63215 75 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 TMEM155Q4W5P6 130 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 CEP78Q5JTW2 689 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 OR2G6Q5TZ20 316 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 TMEM42Q69YG0 159 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 RPL22L1Q6P5R6 122 aaKnown RBP19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 OR5AK2Q8NH90 309 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 CNBD2Q96M20 576 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 ZNF184Q99676 751 aaPredicted RBP19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 FKBP14Q9NWM8 211 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 CLEC2DQ9UHP7 191 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 PCDHB10Q9UN67 800 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 ERGIC3Q9Y282 383 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 PPIAL4AQ9Y536 164 aa19.43■□□□□ 0.7
SMARCB1-205ENST00000417137 ACANP16112 2415 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 hCG_1807616A0A1W2PRN6 198 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 E9PI62 339 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 LMO4P61968 165 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 ZNF154Q13106 437 aa19.42■□□□□ 0.7
SMARCB1-205ENST00000417137 FAM76BQ5HYJ3 339 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms