RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TMEM86BQ8N661 226 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 BBS1Q8NFJ9 593 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 OR8B12Q8NGG6 310 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 OR5P3Q8WZ94 311 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 PIGCQ92535 297 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 TMIGD2Q96BF3 282 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 RNF170Q96K19 258 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 YIPF3Q9GZM5 350 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 ZNF696Q9H7X3 374 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 TVP23BQ9NYZ1 205 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 RPUSD1Q9UJJ7 312 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 POMPQ9Y244 141 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 KLHDC2Q9Y2U9 406 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 KPTNQ9Y664 436 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 IGHV1-69DA0A0B4J2H0 117 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 NDUFB3O43676 98 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 DNAJC8O75937 253 aaPredicted RBP14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 IGHV1-69P01742 117 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 CRYBA1P05813 215 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 ACKR3P25106 362 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 TGM4P49221 684 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 CRISP1P54107 249 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 APOFQ13790 326 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 FAM76BQ5HYJ3 339 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 KCTD18Q6PI47 426 aaPredicted RBP14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 BCAS4Q8TDM0 211 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 LHX4Q969G2 390 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 SLC7A6OSQ96CW6 309 aaPredicted RBP14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 LYZL4Q96KX0 146 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 HIST1H2AAQ96QV6 131 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 TEAD3Q99594 435 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 PKP2Q99959 881 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 DNTTIP1Q9H147 329 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 SLITRK2Q9H156 845 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 ACOXLQ9NUZ1 547 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 HAO2Q9NYQ3 351 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 DNAJB11Q9UBS4 358 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 LRP12Q9Y561 859 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 MMP24Q9Y5R2 645 aa14.53□□□□□ -0.08
PDLIM2-208ENST00000416159 A0A1B0GUS0 222 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 MELTFP08582 738 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 MAP2K3P46734 347 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 CDONQ4KMG0 1287 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 LRRC10Q5BKY1 277 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 PRR31Q5SQ13 230 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 LCN1P1Q5VSP4 162 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 KCTD8Q6ZWB6 473 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 KRT74Q7RTS7 529 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 ZDHHC23Q8IYP9 409 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 SCCPDHQ8NBX0 429 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 LY6G5BQ8NDX9 201 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 RPL3LQ92901 407 aaKnown RBP14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 SEH1LQ96EE3 360 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 MROQ9BYG7 248 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 PAPOLBQ9NRJ5 636 aaKnown RBP14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 POMT1Q9Y6A1 747 aa14.52□□□□□ -0.09
PDLIM2-208ENST00000416159 A0A0U1RQV5 110 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 ZNF816-ZNF321PA0A0X1KG74 233 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 A0A1B0GVI7 797 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 A0A1B0GW55 424 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 FAM181BA6NEQ2 426 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 ZNF254O75437 659 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 DUX4L2P0CJ85 424 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 DUX4L3P0CJ86 424 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 DUX4L4P0CJ87 422 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 DUX4L5P0CJ88 424 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 DUX4L6P0CJ89 424 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 DUX4L7P0CJ90 424 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 ATP6V1B1P15313 513 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 MDKP21741 143 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 DCTDP32321 178 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 HCCSP53701 268 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 ELF3P78545 371 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 STUMQ69YW2 141 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 DUX4L9Q6RFH8 374 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 FIP1L1Q6UN15 594 aaKnown RBP14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 CMTM4Q8IZR5 234 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 FAM216BQ8N7L0 139 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 OR5T2Q8NGG2 359 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 FAM81AQ8TBF8 368 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 TBC1D15Q8TC07 691 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 SSMEM1Q8WWF3 244 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 ASB17Q8WXJ9 295 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 MED30Q96HR3 178 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 RAB3IPQ96QF0 476 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 TNFRSF19Q9NS68 423 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 DUX4Q9UBX2 424 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 TMEM14AQ9Y6G1 99 aa14.51□□□□□ -0.09
PDLIM2-208ENST00000416159 TMEM269A0A1B0GVZ9 245 aa14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 NKX6-3A6NJ46 265 aa14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 AMY2BP19961 511 aa14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 GMFBP60983 142 aa14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 ESRRGP62508 458 aa14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 IKZF1Q13422 519 aa14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 PTGES3Q15185 160 aaKnown RBP14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 FAHD1Q6P587 224 aa14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 VMO1Q7Z5L0 202 aa14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 FGFRL1Q8N441 504 aa14.5□□□□□ -0.09
PDLIM2-208ENST00000416159 KIR3DL3Q8N743 410 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms