RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GRB2P62993 217 aaKnown RBP11.58□□□□□ -0.56
SCN1B-202ENST00000415950 BVESQ8NE79 360 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF331Q9NQX6 463 aaPredicted RBP11.58□□□□□ -0.56
SCN1B-202ENST00000415950 RGPD3A6NKT7 1758 aaPredicted RBP11.58□□□□□ -0.56
SCN1B-202ENST00000415950 RGPD4Q7Z3J3 1758 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 KIR2DS1A0A191URI9 304 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 SEMA7AO75326 666 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 KIR2DS4P43632 304 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 KIR2DS1Q14954 304 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 SLC25A26Q70HW3 274 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 VASH2Q86V25 355 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 TMPRSS13Q9BYE2 586 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 C12orf10Q9HB07 376 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 MMACHCQ9Y4U1 282 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 BCL2L11O43521 198 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 EIF4E2O60573 245 aaKnown RBP11.58□□□□□ -0.56
SCN1B-202ENST00000415950 OR2J2O76002 312 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 EML2O95834 649 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 ARG1P05089 322 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 ZGLP1P0C6A0 271 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 TCN2P20062 427 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 SPINK2P20155 84 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 EIF1P41567 113 aaKnown RBP11.58□□□□□ -0.56
SCN1B-202ENST00000415950 TFAP2EQ6VUC0 442 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF561Q8N587 486 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.58□□□□□ -0.56
SCN1B-202ENST00000415950 C2orf50Q96LR7 162 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 UTP23Q9BRU9 249 aaKnown RBP11.58□□□□□ -0.56
SCN1B-202ENST00000415950 ARHGEF17Q96PE2 2063 aaPredicted RBP11.58□□□□□ -0.56
SCN1B-202ENST00000415950 A0A087WUJ7 227 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 TAAR5O14804 337 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 S100A8P05109 93 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 IL5P05113 134 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 NMBP08949 121 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 FAHP16930 419 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 HOXC8P31273 242 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 UBE2G2P60604 165 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 OR2L13Q8N349 312 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 SLC35G3Q8N808 338 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 TMEM37Q8WXS4 190 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 GAR1Q9NY12 217 aaKnown RBP11.58□□□□□ -0.56
SCN1B-202ENST00000415950 NEUROG3Q9Y4Z2 214 aa11.58□□□□□ -0.56
SCN1B-202ENST00000415950 H3BMH7 237 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 SIRPB1O00241 398 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 IGHA1P01876 353 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 FABP4P15090 132 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 ADRA2CP18825 462 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 RFC3P40938 356 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 DVL1P1P54792 670 aaPredicted RBP11.57□□□□□ -0.56
SCN1B-202ENST00000415950 NANOS3P60323 173 aaKnown RBP11.57□□□□□ -0.56
SCN1B-202ENST00000415950 FBXO46Q6PJ61 603 aaPredicted RBP11.57□□□□□ -0.56
SCN1B-202ENST00000415950 SKA3Q8IX90 412 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 C20orf196Q8IYI0 205 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 OR52N5Q8NH56 324 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 LHFPL5Q8TAF8 219 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 SHANK1Q9Y566 2161 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 ANKRD20A5PA0PJZ0 165 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 E5RGE8 158 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 SLC37A1P57057 533 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 SPRED2Q7Z698 418 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 OR11G2Q8NGC1 345 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 OR10D4PQ8NGN7 298 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 CMTM2Q8TAZ6 248 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 BAHD1Q8TBE0 780 aaPredicted RBP11.57□□□□□ -0.56
SCN1B-202ENST00000415950 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 ZFP64Q9NPA5 681 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 FRRS1LQ9P0K9 344 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 MRM2Q9UI43 246 aaKnown RBP11.57□□□□□ -0.56
SCN1B-202ENST00000415950 NSG2Q9Y328 171 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 SF3B6Q9Y3B4 125 aaKnown RBP11.57□□□□□ -0.56
SCN1B-202ENST00000415950 C7orf66A4D0T2 115 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 F6UZH7 168 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 OR8U8P0C7N1 319 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 CD46P15529 392 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 GLRA1P23415 457 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 ENDOGQ14249 297 aaKnown RBP11.57□□□□□ -0.56
SCN1B-202ENST00000415950 OR8B8Q15620 311 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 RNF212Q495C1 297 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 SCCPDHQ8NBX0 429 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 OR13D1Q8NGV5 346 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 WDR34Q96EX3 536 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 DUSP23Q9BVJ7 150 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 CTDSP1Q9GZU7 261 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 LRP12Q9Y561 859 aa11.57□□□□□ -0.56
SCN1B-202ENST00000415950 A0A1B0GX78 115 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 RNASEK-C17orf49H0YIS7 233 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 OLFM2O95897 454 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 KLF9Q13886 244 aaPredicted RBP11.56□□□□□ -0.56
SCN1B-202ENST00000415950 OR5M9Q8NGP3 310 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 GNPNAT1Q96EK6 184 aaPredicted RBP11.56□□□□□ -0.56
SCN1B-202ENST00000415950 C4orf45Q96LM5 186 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 PBOV1Q9GZY1 135 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 PRO1933Q9H354 126 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 FAM60AQ9NP50 221 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 CLCF1Q9UBD9 225 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 WDR87Q6ZQQ6 2873 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 COL11A1P12107 1806 aaPredicted RBP11.56□□□□□ -0.56
SCN1B-202ENST00000415950 LINC01553A4QN01 128 aa11.56□□□□□ -0.56
SCN1B-202ENST00000415950 CBY3A6NI87 242 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms