RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MYBPHQ13203 477 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 IL15RAQ13261 267 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 HABP2Q14520 560 aaPredicted RBP8.64□□□□□ -1.03
CD44-206ENST00000415148 HIST3H3Q16695 136 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 PLPPR5Q32ZL2 321 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 ANKRD55Q3KP44 614 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 RHBDD2Q6NTF9 364 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 RABEPKQ7Z6M1 372 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 PNLDC1Q8NA58 520 aaKnown RBP8.64□□□□□ -1.03
CD44-206ENST00000415148 TMEM104Q8NE00 496 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 DMBX1Q8NFW5 382 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 OR8B12Q8NGG6 310 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 STT3BQ8TCJ2 826 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 SFT2D1Q8WV19 159 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 DUSP15Q9H1R2 295 aaPredicted RBP8.64□□□□□ -1.03
CD44-206ENST00000415148 OR10A2Q9H208 303 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 FGF21Q9NSA1 209 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 PPP4R1LQ9P1A2 415 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 OSGIN2Q9Y236 505 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 MEMO1Q9Y316 297 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 WIF1Q9Y5W5 379 aa8.64□□□□□ -1.03
CD44-206ENST00000415148 A0A1W2PPE3 182 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 COLCA2A8K830 154 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 PIAS2O75928 621 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 HEXAP06865 529 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 HCKP08631 526 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 PRF1P14222 555 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 ZNF17P17021 662 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 OR3A4PP47883 348 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 OR3A2P47893 321 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 P2RY4P51582 365 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 SNRPEP62304 92 aaKnown RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 SUPT4H1P63272 117 aaKnown RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 ECH1Q13011 328 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 C16orf47Q6ZP98 133 aaPredicted RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 ABHD12BQ7Z5M8 362 aaPredicted RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 NANPQ8TBE9 248 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 ADAMTS17Q8TE56 1095 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 MAFIPQ8WZ33 124 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 EMG1Q92979 244 aaKnown RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 SMIM8Q96KF7 97 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 OXGR1Q96P68 337 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 NRIP2Q9BQI9 281 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 MESP1Q9BRJ9 268 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 TPSD1Q9BZJ3 242 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 SEC61A2Q9H9S3 476 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 PNRC2Q9NPJ4 139 aaKnown RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 GPR84Q9NQS5 396 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 RCC2Q9P258 522 aaKnown RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 LPAR3Q9UBY5 353 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 ATPIF1Q9UII2 106 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 POLR1DQ9Y2S0 133 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 WDR87Q6ZQQ6 2873 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 H3BML4 177 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 ZNF354AO60765 605 aaPredicted RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 HEXBP07686 556 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 AMY2BP19961 511 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 ARFRP1Q13795 201 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 AADACL3Q5VUY0 350 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 DEFB119Q8N690 84 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 CCDC54Q8NEL0 328 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 OR14K1Q8NGZ2 314 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 POC1BQ8TC44 478 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 SLC5A7Q9GZV3 580 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 PARP12Q9H0J9 701 aaKnown RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 METTL8Q9H825 291 aaKnown RBP8.63□□□□□ -1.03
CD44-206ENST00000415148 RHOFQ9HBH0 211 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 BIN3Q9NQY0 253 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 ZFP57Q9NU63 452 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 B3GALT1Q9Y5Z6 326 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 EXPH5Q8NEV8 1989 aa8.63□□□□□ -1.03
CD44-206ENST00000415148 ADAMTS9Q9P2N4 1935 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 IGHV3-20A0A0C4DH32 117 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 FOXI3A8MTJ6 420 aaPredicted RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 SERPINE3A8MV23 424 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 TOX3O15405 576 aaPredicted RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 TRAF3IP2O43734 574 aaPredicted RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 CRTAPO75718 401 aaPredicted RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 IGLV3-1P01715 115 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 NAT2P11245 290 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 NR2C1P13056 603 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 NME2P22392 152 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 ADH6P28332 368 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 LSM6P62312 80 aaKnown RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 RPL7L1Q6DKI1 246 aaKnown RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 ZNF585AQ6P3V2 769 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 Q6ZSR3 168 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 COMMD2Q86X83 199 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 FOXRED2Q8IWF2 684 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 POC1AQ8NBT0 407 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 OR13G1Q8NGZ3 307 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 ARHGAP5-AS1Q96IT6 56 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 NECAB3Q96P71 396 aaPredicted RBP8.62□□□□□ -1.03
CD44-206ENST00000415148 GPER1Q99527 375 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 NUDT22Q9BRQ3 303 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 BANF2Q9H503 90 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 KLRF1Q9NZS2 232 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 PCDHGA1Q9Y5H4 931 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 POMT1Q9Y6A1 747 aa8.62□□□□□ -1.03
CD44-206ENST00000415148 ASXL3Q9C0F0 2248 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms