RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SURF4O15260 269 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 ADAM20O43506 726 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 SPRY3O43610 288 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 SYNGR3O43761 229 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 IDH3BO43837 385 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 SELENOFO60613 162 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 JTBO76095 146 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 LY6G6DO95868 133 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 IFNGP01579 166 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 MRPL3P09001 348 aaKnown RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 PRR23D2P0DMB1 279 aaPredicted RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 SLC2A1P11166 492 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 ANXA8P13928 327 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 DAOP14920 347 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 GABRB1P18505 474 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 TNFRSF1AP19438 455 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 GGT2P36268 569 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 NAA10P41227 235 aaPredicted RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 PPOXP50336 477 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 ARHGDIAP52565 204 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 EFNA4P52798 201 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 HCCSP53701 268 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 CRISP1P54107 249 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 KLF3P57682 345 aaPredicted RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 ACTR3P61158 418 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 LSM6P62312 80 aaKnown RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 COX10Q12887 443 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 GGTLC2Q14390 218 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 KLHL12Q53G59 568 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 SPRNQ5BIV9 151 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 ELFN2Q5R3F8 820 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 SLC27A4Q6P1M0 643 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 FAHD1Q6P587 224 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 CLEC2AQ6UVW9 174 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 PRSS57Q6UWY2 283 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 ZNF771Q7L3S4 317 aaPredicted RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 DCXRQ7Z4W1 244 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 ERI1Q8IV48 349 aaKnown RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 OR5AS1Q8N127 324 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 POC5Q8NA72 575 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 GJC3Q8NFK1 279 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 OR10S1Q8NGN2 331 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 OR2AJ1Q8NGZ0 328 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 OR2T4Q8NH00 348 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 KLF14Q8TD94 323 aaPredicted RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 TMEM170AQ8WVE7 144 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 POP5Q969H6 163 aaKnown RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 SAT2Q96F10 170 aaPredicted RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 PGAM5Q96HS1 289 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 PLEKHA8Q96JA3 519 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 PITX2Q99697 317 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 RHNO1Q9BSD3 238 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 REG4Q9BYZ8 158 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 NMNAT2Q9BZQ4 307 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 RAB1BQ9H0U4 201 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 RIBC2Q9H4K1 309 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 NARFLQ9H6Q4 476 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 PNRC2Q9NPJ4 139 aaKnown RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 HINT3Q9NQE9 182 aaKnown RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 CMC2Q9NRP2 79 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 CENPMQ9NSP4 180 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 TVP23BQ9NYZ1 205 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 EIF3KQ9UBQ5 218 aaKnown RBP4.14□□□□□ -1.75
VPS41-205ENST00000414632 BAIAP2Q9UQB8 552 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 STARD10Q9Y365 291 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 COMMD3-BMI1R4GMX3 469 aa4.14□□□□□ -1.75
VPS41-205ENST00000414632 IGHV3-64DA0A0J9YX35 117 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 LRP5LA4QPB2 252 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 FAM157AC9JC47 383 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 ZNF593O00488 134 aaPredicted RBP4.13□□□□□ -1.75
VPS41-205ENST00000414632 UBE2CO00762 179 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 CTDSP2O14595 271 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 SLC25A17O43808 307 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 PRKYO43930 277 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 TIMM8AO60220 97 aaPredicted RBP4.13□□□□□ -1.75
VPS41-205ENST00000414632 LCATP04180 440 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 COX5BP10606 129 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 FCGR1AP12314 374 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 ZNF250P15622 560 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 PAICSP22234 425 aaKnown RBP4.13□□□□□ -1.75
VPS41-205ENST00000414632 IGFBP5P24593 272 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 COL8A2P25067 703 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 FMO3P31513 532 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 POLR2IP36954 125 aaKnown RBP4.13□□□□□ -1.75
VPS41-205ENST00000414632 ENTPD1P49961 510 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 PDLIM4P50479 330 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 PRKXP51817 358 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 SLC25A1P53007 311 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 F2RL1P55085 397 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 HIST1H3AP68431 136 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 CCL8P80075 99 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 CDK5Q00535 292 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 PSG7Q13046 419 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 APOFQ13790 326 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 EIF2B1Q14232 305 aaKnown RBP4.13□□□□□ -1.75
VPS41-205ENST00000414632 GK3PQ14409 553 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 PTGES3Q15185 160 aaKnown RBP4.13□□□□□ -1.75
VPS41-205ENST00000414632 TAF13Q15543 124 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 TRIP10Q15642 601 aa4.13□□□□□ -1.75
VPS41-205ENST00000414632 SNAPC1Q16533 368 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms