RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 TLE1Q04724 770 aa8.4□□□□□ -1.06
SMPD4-203ENST00000412570 RBPJQ06330 500 aa8.4□□□□□ -1.06
SMPD4-203ENST00000412570 SNTB2Q13425 540 aaKnown RBP8.4□□□□□ -1.06
SMPD4-203ENST00000412570 ZNF79Q15937 498 aa8.4□□□□□ -1.06
SMPD4-203ENST00000412570 HAGHLQ6PII5 290 aaPredicted RBP8.4□□□□□ -1.06
SMPD4-203ENST00000412570 PRR18Q8N4B5 295 aa8.4□□□□□ -1.06
SMPD4-203ENST00000412570 DEFB108BQ8NET1 73 aa8.4□□□□□ -1.06
SMPD4-203ENST00000412570 NUDCD2Q8WVJ2 157 aa8.4□□□□□ -1.06
SMPD4-203ENST00000412570 SNX18Q96RF0 628 aa8.4□□□□□ -1.06
SMPD4-203ENST00000412570 DNAJB11Q9UBS4 358 aa8.4□□□□□ -1.06
SMPD4-203ENST00000412570 ZNF230Q9UIE0 474 aaPredicted RBP8.4□□□□□ -1.06
SMPD4-203ENST00000412570 CSPG4Q6UVK1 2322 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 NPIPB13A6NJU9 1138 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 NPIPB4C9JG80 1138 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 TIMM8AO60220 97 aaPredicted RBP8.4□□□□□ -1.07
SMPD4-203ENST00000412570 CDC14BO60729 498 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 NRASP01111 189 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 ACHEP22303 614 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 MMP15P51511 669 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 BDH1Q02338 343 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 TBC1D28Q2M2D7 210 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 TMEM255AQ5JRV8 349 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 LRRTM1Q86UE6 522 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 SLAMF9Q96A28 289 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 PLPPR2Q96GM1 343 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 TP63Q9H3D4 680 aaPredicted RBP8.4□□□□□ -1.07
SMPD4-203ENST00000412570 SP140LQ9H930 580 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 AKIP1Q9NQ31 210 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 EIF3KQ9UBQ5 218 aaKnown RBP8.4□□□□□ -1.07
SMPD4-203ENST00000412570 ZNF175Q9Y473 711 aa8.4□□□□□ -1.07
SMPD4-203ENST00000412570 HELZ2Q9BYK8 2649 aaKnown RBP8.39□□□□□ -1.07
SMPD4-203ENST00000412570 OR6C6A6NF89 314 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 BOLA2-SMG1P6H3BVE0 249 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 PDCD5O14737 125 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 SS18L1O75177 396 aaPredicted RBP8.39□□□□□ -1.07
SMPD4-203ENST00000412570 ACSM1Q08AH1 577 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 KISS1Q15726 138 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 FAM201AQ5SY85 155 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 UBASH3BQ8TF42 649 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 HS3ST6Q96QI5 342 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 FAM117AQ9C073 453 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 ISYNA1Q9NPH2 558 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 FANCFQ9NPI8 374 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 SPATA2Q9UM82 520 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 SHANK1Q9Y566 2161 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 ABCD4O14678 606 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 GATBO75879 557 aaKnown RBP8.39□□□□□ -1.07
SMPD4-203ENST00000412570 CSTBP04080 98 aaKnown RBP8.39□□□□□ -1.07
SMPD4-203ENST00000412570 GABRA1P14867 456 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 MNDAP41218 407 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 NPBWR2P48146 333 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 CEBPDP49716 269 aaPredicted RBP8.39□□□□□ -1.07
SMPD4-203ENST00000412570 TDGF1P3P51864 188 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 FAM3AP98173 230 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 KRTCAP3Q53RY4 240 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 RIPPLY2Q5TAB7 128 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 PRAMEF6Q5VXH4 476 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 OR2A2Q6IF42 318 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 CALHM1Q8IU99 346 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 OR4S1Q8NGB4 309 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 NANOS1Q8WY41 292 aaKnown RBP8.39□□□□□ -1.07
SMPD4-203ENST00000412570 MNTQ99583 582 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 ZCCHC4Q9H5U6 513 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 CCDC59Q9P031 241 aaKnown RBP8.39□□□□□ -1.07
SMPD4-203ENST00000412570 UBE2QL1A1L167 161 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 ZNF732B4DXR9 585 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 GMDSO60547 372 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 SRSF10O75494 262 aaKnown RBP8.39□□□□□ -1.07
SMPD4-203ENST00000412570 DHRS3O75911 302 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 IL7P13232 177 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 THBS2P35442 1172 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 ART1P52961 327 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 RIPPLY1Q0D2K3 151 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 PIGYQ3MUY2 71 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 PAMR1Q6UXH9 720 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 DOK3Q7L591 496 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 GABRG1Q8N1C3 465 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 BPIFB2Q8N4F0 458 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 GVQW1Q8N7I0 195 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 CELF2-AS1Q8N7Q2 184 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 BEST4Q8NFU0 473 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 OR51T1Q8NGJ9 327 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 TMEM45BQ96B21 275 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 HIST1H2AAQ96QV6 131 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 HDHD3Q9BSH5 251 aaPredicted RBP8.39□□□□□ -1.07
SMPD4-203ENST00000412570 TMEM138Q9NPI0 162 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 NPAP1Q9NZP6 1156 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 NLKQ9UBE8 527 aa8.39□□□□□ -1.07
SMPD4-203ENST00000412570 TMEM272A0A1B0GTI8 110 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 F5H5P2 479 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 F8VVB4 439 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 F8VWA3 439 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 HS3ST1O14792 307 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 SC5DO75845 299 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 CALCRP30988 508 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 CCR6P51684 374 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 PPP1CBP62140 327 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 PRDX4Q13162 271 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 ARFRP1Q13795 201 aa8.38□□□□□ -1.07
SMPD4-203ENST00000412570 RSU1Q15404 277 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms