RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SIX1Q15475 284 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-202ENST00000411767 C9orf153Q5TBE3 101 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 C9orf57Q5W0N0 161 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF770Q6IQ21 691 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-202ENST00000411767 STPG3Q8N7X2 389 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 NIPSNAP1Q9BPW8 284 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 NCOR1P1Q9H4R4 102 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 SPATA31E1Q6ZUB1 1445 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 A0A1W2PS18 150 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 ACRP10323 421 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 FKBP2P26885 142 aaKnown RBP4.16□□□□□ -1.74
PTPN13-202ENST00000411767 CEACAM8P31997 349 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-202ENST00000411767 CKS2P33552 79 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 PSMB10P40306 273 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 DLX6P56179 175 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 LRRC26Q2I0M4 334 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 LGALSLQ3ZCW2 172 aaPredicted RBP4.16□□□□□ -1.74
PTPN13-202ENST00000411767 OXLD1Q5BKU9 147 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 VHLLQ6RSH7 139 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 UNQ9370/PRO34162Q6UXP9 181 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 MOB3BQ86TA1 216 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF385AQ96PM9 386 aaKnown RBP4.16□□□□□ -1.74
PTPN13-202ENST00000411767 RAB40CQ96S21 281 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 PDCD2LQ9BRP1 358 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 TWSG1Q9GZX9 223 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 SPHK2Q9NRA0 654 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 KCNK7Q9Y2U2 307 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 KCNE1BA0A087WTH5 132 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 HMSDA8MTL9 139 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 UPK3BL1B0FP48 263 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 UPK3BL2E5RIL1 263 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 CER1O95813 267 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 EDN1P05305 212 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 EFNB2P52799 333 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 SLC37A1P57057 533 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 LAMTOR1Q6IAA8 161 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 TCEAL8Q8IYN2 117 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 C1orf127Q8N9H9 656 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM178AQ8NBL3 297 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 DNASE2BQ8WZ79 361 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 MEGF10Q96KG7 1140 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 PKMYT1Q99640 499 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 RARRES2Q99969 163 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 PRO1933Q9H354 126 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 DNAJC4Q9NNZ3 241 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 ZDHHC18Q9NUE0 388 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF541Q9H0D2 1346 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 SERTM1A2A2V5 107 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 PSMB11A5LHX3 300 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 MPZL1O95297 269 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 ASAH2BP0C7U1 165 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 HIST1H1DP16402 221 aaKnown RBP4.16□□□□□ -1.74
PTPN13-202ENST00000411767 HOXA5P20719 270 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 COL8A1P27658 744 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 RAC3P60763 192 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 ACVR1Q04771 509 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 PCBP2Q15366 365 aaKnown RBP eCLIP4.16□□□□□ -1.74
PTPN13-202ENST00000411767 HYAL4Q2M3T9 481 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 FAM57BQ71RH2 274 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 DPPA4Q7L190 304 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 OR2L13Q8N349 312 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 KRTCAP2Q8N6L1 136 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 OR4P4Q8NGL7 312 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 OXGR1Q96P68 337 aa4.16□□□□□ -1.74
PTPN13-202ENST00000411767 LMTK3Q96Q04 1460 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 LOC102723996A0A087X1L8 192 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 TRGV10A0A0A0MS01 117 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 TYROBPO43914 113 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 ERGP11308 486 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 RPS4Y1P22090 263 aaKnown RBP4.15□□□□□ -1.74
PTPN13-202ENST00000411767 GPR4P46093 362 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 OR1E2P47887 323 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 UFM1P61960 85 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 LHFPL2Q6ZUX7 228 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 SLC25A42Q86VD7 318 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 GBGT1Q8N5D6 347 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 OR52N2Q8NGI0 321 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 OR1F12Q8NHA8 337 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 IGSF8Q969P0 613 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 ACY3Q96HD9 319 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 KAZALD1Q96I82 304 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF430Q9H8G1 570 aaPredicted RBP4.15□□□□□ -1.74
PTPN13-202ENST00000411767 SRD5A3Q9H8P0 318 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM106BQ9NUM4 274 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 KLK11Q9UBX7 282 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 POMT2Q9UKY4 750 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 MMP17Q9ULZ9 603 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 HS3ST3A1Q9Y663 406 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 PTPRTO14522 1441 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 ODAMA1E959 279 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 SERINC4A6NH21 518 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 LACTBL1A8MY62 500 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 SIRPB1O00241 398 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 C21orf2O43822 256 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 EEDO75530 441 aaKnown RBP4.15□□□□□ -1.74
PTPN13-202ENST00000411767 ETHE1O95571 254 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 CXCL14O95715 111 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 BTCP35070 178 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 SPATA45Q537H7 98 aa4.15□□□□□ -1.74
PTPN13-202ENST00000411767 NIPA1Q7RTP0 329 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms