RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ALKBH3Q96Q83 286 aaPredicted RBP4.71□□□□□ -1.65
R3HDM1-204ENST00000410054 FAM173AQ9BQD7 235 aa4.71□□□□□ -1.65
R3HDM1-204ENST00000410054 NMNAT2Q9BZQ4 307 aa4.71□□□□□ -1.65
R3HDM1-204ENST00000410054 CHST8Q9H2A9 424 aa4.71□□□□□ -1.65
R3HDM1-204ENST00000410054 UQCC1Q9NVA1 299 aa4.71□□□□□ -1.65
R3HDM1-204ENST00000410054 FTSJ1Q9UET6 329 aa4.71□□□□□ -1.65
R3HDM1-204ENST00000410054 C19orf25Q9UFG5 118 aaPredicted RBP4.71□□□□□ -1.65
R3HDM1-204ENST00000410054 ZNF346Q9UL40 294 aaKnown RBP4.71□□□□□ -1.65
R3HDM1-204ENST00000410054 A0A0D9SFI3 127 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 OR2A25A4D2G3 310 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 SHISA8B8ZZ34 492 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 H3BQ15 152 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 GEMIN2O14893 280 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 APOMO95445 188 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 DDAH2O95865 285 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 F12P00748 615 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 TNFRSF1BP20333 461 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 HOXD9P28356 352 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 PPP1CCP36873 323 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 CATR1Q13166 79 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 EDDM3AQ14507 147 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 PARP15Q460N3 678 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 OPN5Q6U736 354 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 COLCA1Q6ZS62 124 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 SLC16A12Q6ZSM3 486 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 IGSF21Q96ID5 467 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 DUX3Q96PT4 197 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 COA1Q9GZY4 146 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 TMEM38BQ9NVV0 291 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 AURKAIP1Q9NWT8 199 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 PLAGL1Q9UM63 463 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 FRMPD1Q5SYB0 1578 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 PIK3C2BO00750 1634 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 TINCRA0A1B0GVN0 87 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 A0A1W2PP55 124 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 GAGE12HA6NDE8 117 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 OR5B21A6NL26 309 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 K7EN84 100 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 M0R129 80 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 NRG2O14511 850 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 TNFSF14O43557 240 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 SYNGR3O43761 229 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 ICOSLGO75144 302 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 HPXP02790 462 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 CHRM4P08173 479 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 CPMP14384 443 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 HIST1H1DP16402 221 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 NMBRP28336 390 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 BRS3P32247 399 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 MTNR1BP49286 362 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 PSMB2P49721 201 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 RPL11P62913 178 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 UBE2L3P68036 154 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 CTBSQ01459 385 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 KLRC3Q07444 240 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 SHHQ15465 462 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 Q1RN00 199 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 MBOAT2Q6ZWT7 520 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 KLHDC8AQ8IYD2 350 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 GALNT16Q8N428 558 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 LCN9Q8WX39 176 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 UPRTQ96BW1 309 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 BTN2A3PQ96KV6 586 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 OR4C12Q96R67 309 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 GPR20Q99678 358 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 SOSTQ9BQB4 213 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 NDC1Q9BTX1 674 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 POPDC3Q9HBV1 291 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 FZD1Q9UP38 647 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 RPL36Q9Y3U8 105 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 ADGRB2O60241 1585 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 QRICH2Q9H0J4 1663 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 SRCAPQ6ZRS2 3230 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 KBTBD11-OT1A0A1B0GTJ5 212 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 TMEM89A2RUT3 159 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 NPIPB5A8MRT5 1133 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 LRP3O75074 770 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 VEGFAP15692 232 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 KITLGP21583 273 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 UBE2NP61088 152 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 CCL7P80098 99 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 ZNF528Q3MIS6 628 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 CD200R1LQ6Q8B3 271 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 GLDNQ6ZMI3 551 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 ZNF620Q6ZNG0 422 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 MEPCEQ7L2J0 689 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 PRSS48Q7RTY5 328 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 OR4K13Q8NH42 304 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 BRK1Q8WUW1 75 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 HOXB13Q92826 284 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 PLPPR2Q96GM1 343 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 HSD17B14Q9BPX1 270 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 WDR83Q9BRX9 315 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 ADAT1Q9BUB4 502 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 ISG20L2Q9H9L3 353 aaKnown RBP4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 EDA2RQ9HAV5 297 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 FGF21Q9NSA1 209 aa4.71□□□□□ -1.66
R3HDM1-204ENST00000410054 LAMTOR3Q9UHA4 124 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms