RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TMEM42Q69YG0 159 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 RDH10Q8IZV5 341 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 BPIFB6Q8NFQ5 453 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 OR8S1Q8NH09 359 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 TMEM80Q96HE8 168 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 MYCBPQ99417 103 aaPredicted RBP18.81■□□□□ 0.6
PTCD3-203ENST00000409783 CNOT2Q9NZN8 540 aaKnown RBP18.81■□□□□ 0.6
PTCD3-203ENST00000409783 CLEC2DQ9UHP7 191 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 EFCAB10A6NFE3 127 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 OR4C45A6NMZ5 311 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 THBS2P35442 1172 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 VHLP40337 213 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 MZT1Q08AG7 82 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 ZNF154Q13106 437 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 ALKBH1Q13686 389 aaKnown RBP18.8■□□□□ 0.6
PTCD3-203ENST00000409783 ZMYND11Q15326 602 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 FAM76BQ5HYJ3 339 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 Q71RC1 249 aaPredicted RBP18.8■□□□□ 0.6
PTCD3-203ENST00000409783 ZDHHC23Q8IYP9 409 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 OR1M1Q8NGA1 313 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 TLNRD1Q9H1K6 362 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 FN3KRPQ9HA64 309 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 ABCB9Q9NP78 766 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 ENPP5Q9UJA9 477 aa18.8■□□□□ 0.6
PTCD3-203ENST00000409783 CAB39Q9Y376 341 aaPredicted RBP18.8■□□□□ 0.6
PTCD3-203ENST00000409783 EXOSC1Q9Y3B2 195 aaKnown RBP18.8■□□□□ 0.6
PTCD3-203ENST00000409783 ANK3Q12955 4377 aaKnown RBP18.8■□□□□ 0.6
PTCD3-203ENST00000409783 NSD1Q96L73 2696 aaPredicted RBP18.79■□□□□ 0.6
PTCD3-203ENST00000409783 LOC107986453A0A1B0GWG9 222 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 ANXA2P2A6NMY6 339 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 H3BSH0 61 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 SYT7O43581 403 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 LMX1BO60663 402 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 ISG15P05161 165 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 GRPP07492 148 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 UBCP0CG48 685 aaKnown RBP18.79■□□□□ 0.6
PTCD3-203ENST00000409783 HSPA13P48723 471 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 GZMKP49863 264 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 BTG1P62324 171 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 HOXA4Q00056 320 aaPredicted RBP18.79■□□□□ 0.6
PTCD3-203ENST00000409783 FAM201AQ5SY85 155 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 OR2G6Q5TZ20 316 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 ZNF826PQ6ZT77 177 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 PEG10Q86TG7 708 aaKnown RBP18.79■□□□□ 0.6
PTCD3-203ENST00000409783 LRRC28Q86X40 367 aaPredicted RBP18.79■□□□□ 0.6
PTCD3-203ENST00000409783 ZNF485Q8NCK3 441 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 MSI2Q96DH6 328 aaKnown RBP18.79■□□□□ 0.6
PTCD3-203ENST00000409783 MICU1Q9BPX6 476 aa18.79■□□□□ 0.6
PTCD3-203ENST00000409783 A0A1B0GVI7 797 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 FSTL3O95633 263 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 IGHV2-5P01817 119 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 TGM4P49221 684 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 CSNK2BP67870 215 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 MRPL28Q13084 256 aaKnown RBP18.78■□□□□ 0.6
PTCD3-203ENST00000409783 CEACAM21Q3KPI0 293 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 DMRTC1Q5HYR2 192 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 TMEM244Q5VVB8 128 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 CYB5R2Q6BCY4 276 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 XAF1Q6GPH4 301 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 AHSA2Q719I0 299 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 CCDC54Q8NEL0 328 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 OR10AC1Q8NH08 325 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 RTL8AQ9BWD3 113 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 C1orf123Q9NWV4 160 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 RNF7Q9UBF6 113 aa18.78■□□□□ 0.6
PTCD3-203ENST00000409783 A6NIN4 97 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 LRRC30A6NM36 301 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 FAM157AC9JC47 383 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 SLC1A7O00341 560 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 ZNF205O95201 554 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 C21orf33P30042 268 aaPredicted RBP18.77■□□□□ 0.6
PTCD3-203ENST00000409783 GTF2A1P52655 376 aaPredicted RBP18.77■□□□□ 0.6
PTCD3-203ENST00000409783 TMEM155Q4W5P6 130 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 CEP78Q5JTW2 689 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 CLVS2Q5SYC1 327 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 OR11L1Q8NGX0 322 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 RPS4Y2Q8TD47 263 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 RNF170Q96K19 258 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 ZNF665Q9H7R5 613 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 TMEM165Q9HC07 324 aa18.77■□□□□ 0.6
PTCD3-203ENST00000409783 FN1P02751 2386 aaKnown RBP18.76■□□□□ 0.59
PTCD3-203ENST00000409783 TMEM210A6NLX4 147 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 LALBAP00709 142 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 NRASP01111 189 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 LHBP01229 141 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 ZNF16P17020 682 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-203ENST00000409783 MYL12AP19105 171 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 GBX2P52951 348 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-203ENST00000409783 CDH15P55291 814 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 WDR82Q6UXN9 313 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 MOB3CQ70IA8 216 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 C1orf87Q8N0U7 546 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 KLHL36Q8N4N3 616 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 GCSAMQ8N6F7 178 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 OR5A2Q8NGI9 324 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 OR52N1Q8NH53 320 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 HAVCR2Q8TDQ0 301 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 GAL3ST1Q99999 423 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 GPR173Q9NS66 373 aa18.76■□□□□ 0.59
PTCD3-203ENST00000409783 PAK1IP1Q9NWT1 392 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms