RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CLPTM1LQ96KA5 538 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 CCL13Q99616 98 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 CHIAQ9BZP6 476 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 TNFRSF19Q9NS68 423 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 ZNF319Q9P2F9 582 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 DNAJB11Q9UBS4 358 aa12.18□□□□□ -0.46
CBX3-203ENST00000409747 CAB39Q9Y376 341 aaPredicted RBP12.18□□□□□ -0.46
CBX3-203ENST00000409747 NDUFA7O95182 113 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 CST4P01036 141 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 ANXA8P13928 327 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 OMGP23515 440 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 RPS7P62081 194 aaKnown RBP12.17□□□□□ -0.46
CBX3-203ENST00000409747 CDK5Q00535 292 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 PRDX4Q13162 271 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 STUMQ69YW2 141 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 C17orf107Q6ZR85 190 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 PAPD5Q8NDF8 572 aaKnown RBP12.17□□□□□ -0.46
CBX3-203ENST00000409747 DNAJC9Q8WXX5 260 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 DYRK2Q92630 601 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 HAO2Q9NYQ3 351 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 ONECUT1Q9UBC0 465 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 LAMP5Q9UJQ1 280 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 ZNF850A8MQ14 1090 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.17□□□□□ -0.46
CBX3-203ENST00000409747 GUCA2AQ02747 115 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 DNAL1Q4LDG9 190 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 ATPAF1Q5TC12 328 aaPredicted RBP12.17□□□□□ -0.46
CBX3-203ENST00000409747 TREML4Q6UXN2 200 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 KCTD8Q6ZWB6 473 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 VMO1Q7Z5L0 202 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 KRT77Q7Z794 578 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 TMEM179BQ7Z7N9 219 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 LDLRAD3Q86YD5 345 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 CPOQ8IVL8 374 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 ZDHHC23Q8IYP9 409 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 FAM216BQ8N7L0 139 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 LY6G5BQ8NDX9 201 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 FAM81AQ8TBF8 368 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 NPRL2Q8WTW4 380 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 HIST1H2AAQ96QV6 131 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 PKP2Q99959 881 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 FAM96BQ9Y3D0 163 aa12.17□□□□□ -0.46
CBX3-203ENST00000409747 ACOD1A6NK06 481 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 FCN3O75636 299 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 ACKR3P25106 362 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 IKZF1Q13422 519 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 FLOT2Q14254 428 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 KCTD18Q6PI47 426 aaPredicted RBP12.16□□□□□ -0.46
CBX3-203ENST00000409747 METAP1DQ6UB28 335 aaPredicted RBP12.16□□□□□ -0.46
CBX3-203ENST00000409747 OR8B12Q8NGG6 310 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 WFDC12Q8WWY7 111 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 LRTOMTQ8WZ04 291 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 PIGCQ92535 297 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 TAF15Q92804 592 aaKnown RBP eCLIP12.16□□□□□ -0.46
CBX3-203ENST00000409747 MED30Q96HR3 178 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 RNF170Q96K19 258 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 DPAGT1Q9H3H5 408 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 SLC25A19Q9HC21 320 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 C1RLQ9NZP8 487 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 DNAJB9Q9UBS3 223 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 LRP12Q9Y561 859 aa12.16□□□□□ -0.46
CBX3-203ENST00000409747 ZNF816-ZNF321PA0A0X1KG74 233 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 A0A1B0GW55 424 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 WIPF1O43516 503 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 DUX4L2P0CJ85 424 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 DUX4L3P0CJ86 424 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 DUX4L4P0CJ87 422 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 DUX4L5P0CJ88 424 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 DUX4L6P0CJ89 424 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 DUX4L7P0CJ90 424 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 MAP2K3P46734 347 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 TGM4P49221 684 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 FAM76BQ5HYJ3 339 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 LCN1P1Q5VSP4 162 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 OLFML2AQ68BL7 652 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 DEGS2Q6QHC5 323 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 DUX4L9Q6RFH8 374 aaPredicted RBP12.15□□□□□ -0.46
CBX3-203ENST00000409747 SPATA24Q86W54 205 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 RPL3LQ92901 407 aaKnown RBP12.15□□□□□ -0.46
CBX3-203ENST00000409747 RAB3IPQ96QF0 476 aaPredicted RBP12.15□□□□□ -0.46
CBX3-203ENST00000409747 DCTN5Q9BTE1 182 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 MROQ9BYG7 248 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 PRRG3Q9BZD7 231 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 YIPF3Q9GZM5 350 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 PPP1R3EQ9H7J1 279 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 DUX4Q9UBX2 424 aa12.15□□□□□ -0.46
CBX3-203ENST00000409747 A0A0U1RQK1 487 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 A0A0U1RQV5 110 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 BTBD17A6NE02 478 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 GYG2O15488 501 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 FBP1P09467 338 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 ATP6V1B1P15313 513 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 ALOX5APP20292 161 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 SLC2A5P22732 501 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 EEF1B2P24534 225 aaKnown RBP12.14□□□□□ -0.47
CBX3-203ENST00000409747 CBX1P83916 185 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 C8orf46Q8TAG6 207 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 H1FXQ92522 213 aaKnown RBP12.14□□□□□ -0.47
CBX3-203ENST00000409747 LYZL4Q96KX0 146 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms