RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 EPHA8P29322 1005 aaPredicted RBP8.63□□□□□ -1.03
MSH2-202ENST00000406134 PRAMEF20Q5VT98 475 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 KLHL24Q6TFL4 600 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 BOLLQ8N9W6 283 aaKnown RBP8.63□□□□□ -1.03
MSH2-202ENST00000406134 OR10H5Q8NGA6 315 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 OR51F2Q8NH61 342 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 SAP25Q8TEE9 199 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 MAFIPQ8WZ33 124 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 WNT2BQ93097 391 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 CLDN23Q96B33 292 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 RAB3CQ96E17 227 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 UCN2Q96RP3 112 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 TM2D1Q9BX74 207 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 UBE2ZQ9H832 354 aaPredicted RBP8.63□□□□□ -1.03
MSH2-202ENST00000406134 PCDHGA1Q9Y5H4 931 aa8.63□□□□□ -1.03
MSH2-202ENST00000406134 IGHV3-15A0A0B4J1V0 119 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 EEF1E1-BLOC1S5C9J1V9 151 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 ZIC3O60481 467 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 PSMB6P28072 239 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 HAAOP46952 286 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 SLC6A9P48067 706 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 SNAI3Q3KNW1 292 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 TMEM128Q5BJH2 165 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 ELP2Q6IA86 826 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 KCTD9Q7L273 389 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 POC1AQ8NBT0 407 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 LRRC46Q96FV0 321 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 IFT46Q9NQC8 304 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 FLVCR1Q9Y5Y0 555 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 IGKV1-27A0A075B6S5 117 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 FIGNL2A6NMB9 653 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 CHRM2P08172 466 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 DBHP09172 617 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 KISS1Q15726 138 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 KRTAP27-1Q3LI81 207 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 ZNF600Q6ZNG1 722 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 SPEM1Q8N4L4 309 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 OR5D18Q8NGL1 313 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 FBXO17Q96EF6 278 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 SHDQ96IW2 340 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 TMEM59Q9BXS4 323 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 METTL7AQ9H8H3 244 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 CHMP1AQ9HD42 196 aaPredicted RBP8.62□□□□□ -1.03
MSH2-202ENST00000406134 IGHV1-45A0A0A0MS14 117 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 KANTRA0A1W2PQU2 76 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 ABCD4O14678 606 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 SIGLEC6O43699 453 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 ZFAND5O76080 213 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 VAMP1P23763 118 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 PTGER4P35408 488 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 SUCLG1P53597 346 aaKnown RBP8.62□□□□□ -1.03
MSH2-202ENST00000406134 TMEM176BQ3YBM2 270 aaPredicted RBP8.62□□□□□ -1.03
MSH2-202ENST00000406134 SHEQ5VZ18 495 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 DOK3Q7L591 496 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 ZNF101Q8IZC7 436 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 IMMP1LQ96LU5 166 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 PDCD10Q9BUL8 212 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 ZNF471Q9BX82 626 aaPredicted RBP8.62□□□□□ -1.03
MSH2-202ENST00000406134 PECRQ9BY49 303 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 SESN1Q9Y6P5 492 aa8.62□□□□□ -1.03
MSH2-202ENST00000406134 KLF7O75840 302 aaPredicted RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 CCL3P10147 92 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 COX6A1P12074 109 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 ZNF20P17024 532 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 FPR2P25090 351 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 ACKR3P25106 362 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 ADH6P28332 368 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 ACY1Q03154 408 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 PLEKHN1Q494U1 663 aaPredicted RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 LURAP1LQ8IV03 231 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 ARRDC1Q8N5I2 433 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 OR4K17Q8NGC6 315 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 SRXN1Q9BYN0 137 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 DECR2Q9NUI1 292 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 SDCBPO00560 298 aaPredicted RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 TERTO14746 1132 aaKnown RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 NDUFA2O43678 99 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 SCGNO76038 276 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 GLRA1P23415 457 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 PTGFRP43088 359 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 CLDN17P56750 224 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 LSM6P62312 80 aaKnown RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 EIF3IQ13347 325 aaKnown RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 GUCA2BQ16661 112 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 PABPC1L2AQ5JQF8 200 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 GTPBP8Q8N3Z3 284 aaPredicted RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 KCNG3Q8TAE7 436 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 DOCK10Q96BY6 2186 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 HDHD3Q9BSH5 251 aaPredicted RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 ADAT1Q9BUB4 502 aaKnown RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 CRB3Q9BUF7 120 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 SLC5A7Q9GZV3 580 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 HDGFL3Q9Y3E1 203 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 A0A0U1RQV5 110 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 DHRS7CA6NNS2 312 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 FAM157AC9JC47 383 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 CRTAPO75718 401 aaPredicted RBP8.61□□□□□ -1.03
MSH2-202ENST00000406134 APOC3P02656 99 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 FAHP16930 419 aa8.61□□□□□ -1.03
MSH2-202ENST00000406134 IGFBP4P22692 258 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms