RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 DDOSTP39656 456 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 EFNB1P98172 346 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 PAX2Q02962 417 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 MFGE8Q08431 387 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 PRDX4Q13162 271 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 ARMCX4Q5H9R4 360 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 KLF17Q5JT82 389 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 LCN1P1Q5VSP4 162 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 AADACL4Q5VUY2 407 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 WDR25Q64LD2 544 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUX4L9Q6RFH8 374 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF841Q6ZN19 808 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DCDC5Q6ZRR9 648 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 CCDC121Q6ZUS5 278 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 RHOUQ7L0Q8 258 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 MEPCEQ7L2J0 689 aaKnown RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 FAM90A1Q86YD7 464 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 C11orf53Q8IXP5 236 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLC35F2Q8IXU6 374 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 BCL6BQ8N143 479 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 FGFRL1Q8N441 504 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 BPIFB2Q8N4F0 458 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 SPERTQ8NA61 448 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR1M1Q8NGA1 313 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR52H1Q8NGJ2 320 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 NANPQ8TBE9 248 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 TMEM163Q8TC26 289 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR51E1Q8TCB6 317 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF418Q8TF45 676 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 FBLIM1Q8WUP2 373 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 LRRC29Q8WV35 223 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 RAB40AQ8WXH6 277 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 PIGCQ92535 297 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 RPL3LQ92901 407 aaKnown RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 UBE2FQ969M7 185 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 ERGIC1Q969X5 290 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 CENPNQ96H22 339 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 FAM71F1Q96KD3 344 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 TECTBQ96PL2 329 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUX5Q96PT3 197 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR8B4Q96RC9 309 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 TBX5Q99593 518 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 PKP2Q99959 881 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 YIPF3Q9GZM5 350 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 OPA3Q9H6K4 179 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 SP140LQ9H930 580 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 ADGRL4Q9HBW9 690 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 SMURF1Q9HCE7 757 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 ESM1Q9NQ30 184 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 C14orf119Q9NWQ9 140 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 FAM206AQ9NX38 181 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 DUX4Q9UBX2 424 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 CLN8Q9UBY8 286 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF69Q9UC07 566 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 GTF2A1LQ9UNN4 478 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 POLR3KQ9Y2Y1 108 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 NOP16Q9Y3C1 178 aaKnown RBP4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 RNF114Q9Y508 228 aa4.8□□□□□ -1.64
HMGB1P20-201ENST00000402555 TRAV40A0A0B4J280 105 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 IGHV2-70DA0A0C4DH43 119 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 TMEM269A0A1B0GVZ9 245 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 OOEPA6NGQ2 149 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 ANXA2P2A6NMY6 339 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 H3BSH0 61 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 CDIPTO14735 213 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 TNFRSF13BO14836 293 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 SRSF10O75494 262 aaKnown RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 LHBP01229 141 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 FAHP16930 419 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 CFL1P23528 166 aaKnown RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 ADMP35318 185 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 PSMB10P40306 273 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 RIDAP52758 137 aaKnown RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 HILS1P60008 231 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 CXCR4P61073 352 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 ACTR3P61158 418 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 ROM1Q03395 351 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 PAX8Q06710 450 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZIK1Q3SY52 487 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 CEP78Q5JTW2 689 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 NXNL2Q5VZ03 156 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 KCTD18Q6PI47 426 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF322Q6U7Q0 402 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 BTNL3Q6UXE8 466 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 WDR82Q6UXN9 313 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 KCTD8Q6ZWB6 473 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 NLRC3Q7RTR2 1065 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 SSX6Q7RTT6 188 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 COMMD2Q86X83 199 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF679Q8IYX0 411 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 SIGLECL1Q8N7X8 197 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 CSNK2A3Q8NEV1 391 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR5T2Q8NGG2 359 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR51G2Q8NGK0 314 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 FAM81AQ8TBF8 368 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 HPSE2Q8WWQ2 592 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 DACT3Q96B18 629 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 RNF170Q96K19 258 aa4.79□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF48Q96MX3 618 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms