RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 SDHBP21912 280 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 PRKACBP22694 351 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 MPZP25189 248 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 MPGP29372 298 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 ARR3P36575 388 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 OR3A2P47893 321 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 GZMKP49863 264 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 RPS27AP62979 156 aaKnown RBP10.65□□□□□ -0.71
CLIP4-203ENST00000401617 PLAC9Q5JTB6 97 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 CLVS2Q5SYC1 327 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 ZBTB37Q5TC79 503 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 C9orf135Q5VTT2 229 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 FBXW9Q5XUX1 488 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 IGFL3Q6UXB1 125 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 ASCL4Q6XD76 172 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 ASCL5Q7RTU5 278 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 SLC36A1Q7Z2H8 476 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 DPPA2Q7Z7J5 298 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 CHST4Q8NCG5 386 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 OR51S1Q8NGJ8 323 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 DVL3Q92997 716 aaPredicted RBP10.65□□□□□ -0.71
CLIP4-203ENST00000401617 MS4A3Q96HJ5 214 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 GMPPAQ96IJ6 420 aaPredicted RBP10.65□□□□□ -0.71
CLIP4-203ENST00000401617 TM2D1Q9BX74 207 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 CST11Q9H112 138 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 BANF2Q9H503 90 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.65□□□□□ -0.71
CLIP4-203ENST00000401617 GLRX2Q9NS18 164 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 GPR173Q9NS66 373 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 KCNK7Q9Y2U2 307 aa10.65□□□□□ -0.71
CLIP4-203ENST00000401617 PYCARD-AS1I3L0S3 204 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 SOCS1O15524 211 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 SSX5O60225 188 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 RAB3DO95716 219 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 IL18BPO95998 194 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 GNB3P16520 340 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 RAD52P43351 418 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 IFITM2Q01629 132 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 GUSBP1Q15486 140 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 SLC22A6Q4U2R8 563 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 DMRTC1Q5HYR2 192 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 BEST4Q8NFU0 473 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 OR56B1Q8NGI3 324 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 NPRL2Q8WTW4 380 aa10.64□□□□□ -0.71
CLIP4-203ENST00000401617 BCL2L2Q92843 193 aaPredicted RBP10.64□□□□□ -0.71
CLIP4-203ENST00000401617 URM1Q9BTM9 101 aaKnown RBP10.64□□□□□ -0.71
CLIP4-203ENST00000401617 COL25A1Q9BXS0 654 aaPredicted RBP10.64□□□□□ -0.71
CLIP4-203ENST00000401617 SNRPGP15A8MWD9 76 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 ZNF736B4DX44 427 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 MFNGO00587 321 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 CRTAPO75718 401 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 HIST1H1DP16402 221 aaKnown RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 NAT1P18440 290 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 CXCL3P19876 107 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 ERP29P30040 261 aaKnown RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 CNN3Q15417 329 aaKnown RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 PNLIPRP3Q17RR3 467 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 ZNF584Q8IVC4 421 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 OR1K1Q8NGR3 316 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 OR8S1Q8NH09 359 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 TNFAIP8L1Q8WVP5 186 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 PIGTQ969N2 578 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 RAB3CQ96E17 227 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 POM121L2Q96KW2 1035 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 GINS4Q9BRT9 223 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 BEX1Q9HBH7 125 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 SLC2A8Q9NY64 477 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 ING4Q9UNL4 249 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 NPTNQ9Y639 398 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 GTF3C1Q12789 2109 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 PTPRZ1P23471 2315 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 IGKV1-27A0A075B6S5 117 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 MEIKINA0A087WXM9 373 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 OR14I1A6ND48 311 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 WISP2O76076 250 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 NRASP01111 189 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 VSIG10L2P0DP72 767 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 ANXA7P20073 488 aaKnown RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 RAB1AP62820 205 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 TMEM53Q6P2H8 277 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 TRAPPC6BQ86SZ2 158 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 RTN4RL2Q86UN3 420 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 STEAP2Q8NFT2 490 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 OR5D18Q8NGL1 313 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 NUDCD2Q8WVJ2 157 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 CPNE2Q96FN4 548 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 TECTBQ96PL2 329 aa10.63□□□□□ -0.71
CLIP4-203ENST00000401617 SLC25A21Q9BQT8 299 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 REPIN1Q9BWE0 567 aaKnown RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 TINAGL1Q9GZM7 467 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 ALX4Q9H161 411 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 PAIP2BQ9ULR5 123 aaKnown RBP10.63□□□□□ -0.71
CLIP4-203ENST00000401617 MGMTP16455 207 aa10.62□□□□□ -0.71
CLIP4-203ENST00000401617 MTCP1P56278 107 aa10.62□□□□□ -0.71
CLIP4-203ENST00000401617 MEF2DQ14814 521 aa10.62□□□□□ -0.71
CLIP4-203ENST00000401617 ZNF626Q68DY1 528 aa10.62□□□□□ -0.71
CLIP4-203ENST00000401617 LHFPL2Q6ZUX7 228 aa10.62□□□□□ -0.71
CLIP4-203ENST00000401617 ZNF75AQ96N20 296 aa10.62□□□□□ -0.71
CLIP4-203ENST00000401617 SEC22CQ9BRL7 303 aa10.62□□□□□ -0.71
CLIP4-203ENST00000401617 C12orf49Q9H741 205 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms