RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 A0A1W2PR80 420 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 PLPP3O14495 311 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 NDUFA6P56556 154 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 RAC1P63000 192 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 OR10P1Q8NGE3 313 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 DOK1Q99704 481 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 PLEKHA2Q9HB19 425 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 MED9Q9NWA0 146 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 KPTNQ9Y664 436 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 HEXAP06865 529 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 PSG6Q00889 435 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 KISS1Q15726 138 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 HAGHQ16775 308 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF774Q6NX45 483 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 ADPRHL1Q8NDY3 354 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 BTF3L4Q96K17 158 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 TECTBQ96PL2 329 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 A0A1W2PPV9 198 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 FUT3P21217 361 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 TMEM41BQ5BJD5 291 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 OR2A2Q6IF42 318 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 SLC16A12Q6ZSM3 486 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 SMIM15Q7Z3B0 74 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-204ENST00000400337 OR4D11Q8NGI4 311 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 OR10D3Q8NH80 312 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 C14orf79Q96F83 325 aa16.26■□□□□ 0.19
COL18A1-204ENST00000400337 MT-ND4LP03901 98 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 OR10J4P0C629 311 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 GFRALQ6UXV0 394 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 NLRC3Q7RTR2 1065 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 ZFP62Q8NB50 900 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF764Q96H86 408 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-204ENST00000400337 FBXO4Q9UKT5 387 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 EXOSC2Q13868 293 aaKnown RBP16.25■□□□□ 0.19
COL18A1-204ENST00000400337 CD226Q15762 336 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 CXorf67Q86X51 503 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-204ENST00000400337 TMEM231Q9H6L2 316 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF629Q9UEG4 869 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-204ENST00000400337 TRAPPC4Q9Y296 219 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 MPZL1O95297 269 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF32P17041 273 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 GALP22466 123 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 MRPS24Q96EL2 167 aaKnown RBP16.25■□□□□ 0.19
COL18A1-204ENST00000400337 BSCL2Q96G97 398 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-204ENST00000400337 NKX6-2Q9C056 277 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-204ENST00000400337 GNB4Q9HAV0 340 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 OSGIN2Q9Y236 505 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 FFAR1O14842 300 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 PCMT1P22061 227 aa16.25■□□□□ 0.19
COL18A1-204ENST00000400337 TMEM272A0A1B0GTI8 110 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 PRSS23O95084 383 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 NTN1O95631 604 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 AVPR2P30518 371 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 TMEM128Q5BJH2 165 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 BAP18Q8IXM2 172 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 TMEM123Q8N131 208 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 C10orf111Q8N326 155 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 CMBLQ96DG6 245 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 TRBV5-3A0A0A0MS03 114 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 GALR2O43603 387 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-204ENST00000400337 SPRY3O43610 288 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 EIF4EBP2Q13542 120 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-204ENST00000400337 GALNT16Q8N428 558 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 ARRDC1Q8N5I2 433 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF439Q8NDP4 499 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 CMTM3Q96MX0 182 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 VSTM2LQ96N03 204 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 SLC25A32Q9H2D1 315 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 PLSCR3Q9NRY6 295 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 GAB2Q9UQC2 676 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 CRYABP02511 175 aaKnown RBP16.24■□□□□ 0.19
COL18A1-204ENST00000400337 DHODHQ02127 395 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 RNPS1Q15287 305 aaKnown RBP16.24■□□□□ 0.19
COL18A1-204ENST00000400337 OR2T2Q6IF00 324 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 GALMQ96C23 342 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 MED30Q96HR3 178 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 OCIAD1Q9NX40 245 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 MTCH1Q9NZJ7 389 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 DHRS3O75911 302 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 RAB13P51153 203 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 DEGS2Q6QHC5 323 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 Q7L0L9 218 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 BAGE3Q86Y29 109 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 BAGE2Q86Y30 109 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 C20orf196Q8IYI0 205 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF680Q8NEM1 530 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 ARHGAP5-AS1Q96IT6 56 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 FLRT3Q9NZU0 649 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 ATG2BQ96BY7 2078 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 HRKO00198 91 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 YIF1AO95070 293 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 SEMG1P04279 462 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 RPS16P62249 146 aaKnown RBP16.24■□□□□ 0.19
COL18A1-204ENST00000400337 OR10Z1Q8NGY1 313 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 C12orf10Q9HB07 376 aa16.24■□□□□ 0.19
COL18A1-204ENST00000400337 COL5A3P25940 1745 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-204ENST00000400337 MARF1Q9Y4F3 1742 aaKnown RBP16.23■□□□□ 0.19
COL18A1-204ENST00000400337 WNT1P04628 370 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 GNG3P63215 75 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms