RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 SPATA6Q9NWH7 488 aaPredicted RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SIRPB2Q5JXA9 342 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SPANXN1Q5VSR9 72 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 DPPA3Q6W0C5 159 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 OR1K1Q8NGR3 316 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SPPL3Q8TCT6 385 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 RGP1Q92546 391 aaPredicted RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 YIPF6Q96EC8 236 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 K7EQS6 105 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 MGPP08493 103 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 PLAURQ03405 335 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 TMEM140Q9NV12 185 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 JUNBP17275 347 aaPredicted RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 OR1N1Q8NGS0 311 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 GPR152Q8TDT2 470 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 TEX101Q9BY14 249 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 FGF5P12034 268 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SLC25A34Q6PIV7 304 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 CPEB2Q7Z5Q1 589 aaKnown RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 FAM26EQ8N5C1 309 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SSC4DQ8WTU2 575 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SLC25A2Q9BXI2 301 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 HSD3B7Q9H2F3 369 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 MAP1LC3AQ9H492 121 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 DUSP21Q9H596 190 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 UQCC1Q9NVA1 299 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 ALPLP05186 524 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 MRPL58Q14197 206 aaKnown RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF678Q5SXM1 525 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 C2CD4AQ8NCU7 369 aaPredicted RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 PIK3IP1Q96FE7 263 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 TMEM19Q96HH6 336 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 DPH3P1Q9H4G8 78 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SIRT5Q9NXA8 310 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 HSFX1Q9UBD0 423 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 A8MWL6 223 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 EGR1P18146 543 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SEMG2Q02383 582 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 ROM1Q03395 351 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 KHSRPQ92945 711 aaKnown RBP eCLIP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 CHST6Q9GZX3 395 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 AICDAQ9GZX7 198 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 IGSF1Q8N6C5 1336 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 FAM159BA6NKW6 160 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 KDM4EB2RXH2 506 aaPredicted RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 CLDN5O00501 218 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 LANCL1O43813 399 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 MBPP02686 304 aaPredicted RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 PRRX1P54821 245 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 PELI2Q9HAT8 420 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 IL37Q9NZH6 218 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SHC1P29353 583 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 ELAVL3Q14576 367 aaKnown RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 CNIH4Q9P003 139 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 FDCSPQ8NFU4 85 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 SNX22Q96L94 193 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF446Q9NWS9 450 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 CA12O43570 354 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 PAPLNO95428 1278 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ONECUT2O95948 504 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 NNATQ16517 81 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 FIGLAQ6QHK4 219 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 KIR2DL4Q99706 377 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 KCNK7Q9Y2U2 307 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 TRAV8-2A0A0B4J237 113 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ANKRD61A6NGH8 418 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 T-ENOLP0DO92 83 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 SELPP16109 830 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 GCSAMLQ5JQS6 135 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF691Q5VV52 312 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 DLEU7Q6UYE1 221 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF841Q6ZN19 808 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 RUSC2Q8N2Y8 1516 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ACY3Q96HD9 319 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 BTNL2Q9UIR0 455 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 TRAV8-7A0A075B6U6 113 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 HS3ST1O14792 307 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 SPATA45Q537H7 98 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 GMPPAQ96IJ6 420 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ADGRB3O60242 1522 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 TMPRSS11DO60235 418 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ASAH1Q13510 395 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 NR2C2APQ86WQ0 139 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 NXT2Q9NPJ8 142 aaKnown RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 EFSO43281 561 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 SRP14P37108 136 aaKnown RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 RING1Q06587 406 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 METTL27Q8N6F8 245 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF300Q96RE9 604 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ORAI2Q96SN7 254 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 INPP5KQ9BT40 448 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 PIPP12273 146 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 MDP1Q86V88 176 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF687Q8N1G0 1237 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 TRBV7-9A0A0J9YWB2 115 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 SSR4P51571 173 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 OR52N4Q8NGI2 321 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 PELI1Q96FA3 418 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 SPHK2Q9NRA0 654 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 AGPAT4Q9NRZ5 378 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms