RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 LGI3Q8N145 548 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 RAB37Q96AX2 223 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 MED17Q9NVC6 651 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 M0R135 149 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 GEMIN2O14893 280 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 TO15178 435 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 GPANK1O95872 356 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 CLDN12P56749 244 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 RPL27P61353 136 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 FABP9Q0Z7S8 132 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 SCARB1Q8WTV0 552 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 ASB13Q8WXK3 278 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 ZNF799Q96GE5 643 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 ALKBH3Q96Q83 286 aaPredicted RBP9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 CTDSP1Q9GZU7 261 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 ACOD1A6NK06 481 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 PMS2P2O95744 297 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 FURINP09958 794 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 S100A11P31949 105 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 ZFP36L2P47974 494 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 TFPI2P48307 235 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 TMEM267Q0VDI3 215 aaPredicted RBP9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 ECSCRQ19T08 205 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 HENMT1Q5T8I9 393 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 GLCCI1Q86VQ1 547 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 OR13D1Q8NGV5 346 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 RPUSD4Q96CM3 377 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 SLAMF8Q9P0V8 285 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 RAB22AQ9UL26 194 aa9.9□□□□□ -0.82
CACNA1C-210ENST00000399606 LOC100289279A0A1B0GTE1 492 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 TMPRSS2O15393 492 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 RHBDL1O75783 438 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 GLI4P10075 376 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 RANP62826 216 aaKnown RBP9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 OR4C3Q8NH37 302 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 BAHD1Q8TBE0 780 aaPredicted RBP9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 PERPQ96FX8 193 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 TMEM147Q9BVK8 224 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 AMDHD2Q9Y303 409 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 PPOXP50336 477 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 ACOT6Q3I5F7 207 aaPredicted RBP9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 ZNF793Q6ZN11 406 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 CDH26Q8IXH8 852 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 POM121L2Q96KW2 1035 aa9.9□□□□□ -0.83
CACNA1C-210ENST00000399606 PSMB1P20618 241 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 ETFDHQ16134 617 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 PGBD5Q8N414 524 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 MFSD4AQ8N468 514 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 RELL2Q8NC24 303 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 KTI12Q96EK9 354 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 ACTR3CQ9C0K3 210 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 H2AFB1P0C5Y9 115 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 CEACAM16Q2WEN9 425 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 TIGITQ495A1 244 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 IL22RA2Q969J5 263 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 KCTD12Q96CX2 325 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 PKMYT1Q99640 499 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 HSD17B10Q99714 261 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 DUSP21Q9H596 190 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 FBXO34Q9NWN3 711 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 TAS2R5Q9NYW4 299 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 TBX21Q9UL17 535 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 U3KQ87 197 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 IGHV1OR15-9A0A0B4J2B8 117 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 SHISA8B8ZZ34 492 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 DCTN6O00399 190 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 UBE2L6O14933 153 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 GPRIN2O60269 458 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 TSPAN13O95857 204 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 VDAC1P21796 283 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 OPRK1P41145 380 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 RBM11P57052 281 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 B2MP61769 119 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 SNRPGP62308 76 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 LEXMQ3ZCV2 418 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 OR1L4Q8NGR5 311 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 OR51E1Q8TCB6 317 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 RNF24Q9Y225 148 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 TMEM200CA6NKL6 621 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 TRIM77I1YAP6 450 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 PDGFBP01127 241 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 PNLIPRP2P54317 469 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 METRNLQ641Q3 311 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 TBPL2Q6SJ96 375 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 RNF113BQ8IZP6 322 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 KLHDC1Q8N7A1 406 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 ARHGDIGQ99819 225 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 SAP30LQ9HAJ7 183 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 TRABD2BA6NFA1 517 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 DEFB108AA8MXU0 73 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 ZNF205O95201 554 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 ARG1P05089 322 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 TOR2AQ5JU69 321 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 LILRA3Q8N6C8 439 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 DYNC2LI1Q8TCX1 351 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 CHRDL1Q9BU40 450 aa9.89□□□□□ -0.83
CACNA1C-210ENST00000399606 SOX21Q9Y651 276 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms