RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 RFPL4AA6NLU0 287 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 FOXI3A8MTJ6 420 aaPredicted RBP15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ZNF724A8MTY0 619 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 E9PLN8 166 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 RFPL4AL1F8VTS6 287 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 MRPL33O75394 65 aaKnown RBP15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SYNGR4O95473 234 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 FCGR2AP12318 317 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 MGMTP16455 207 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ZBTB25P24278 435 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 CD82P27701 267 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 S100A11P31949 105 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 HRH1P35367 487 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 STARP49675 285 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 CEACAM16Q2WEN9 425 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SLC22A6Q4U2R8 563 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ESCO2Q56NI9 601 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 PLAC9Q5JTB6 97 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SPINK14Q6IE38 97 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 GALNTL5Q7Z4T8 443 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 TMED4Q7Z7H5 227 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 CD163Q86VB7 1156 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 HOGA1Q86XE5 327 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 MITD1Q8WV92 249 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 FAM122AQ96E09 287 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 MRPS24Q96EL2 167 aaKnown RBP15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 PHB2Q99623 299 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 DPCDQ9BVM2 203 aaPredicted RBP15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 OR2H1Q9GZK4 316 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 NOSIPQ9Y314 301 aaKnown RBP15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 AUP1Q9Y679 476 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 A0A0A6YYD4 124 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SOCS1O15524 211 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 XRCC2O43543 280 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 RPA2P15927 270 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 FAHP16930 419 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ZNF32P17041 273 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 CD34P28906 385 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ECI1P42126 302 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 LHX2P50458 406 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 OR1C1Q15619 314 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 TMEM42Q69YG0 159 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ASCL4Q6XD76 172 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 LHFPL2Q6ZUX7 228 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 TMEM185AQ8NFB2 350 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 OR5M8Q8NGP6 311 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ZNF837Q96EG3 531 aaPredicted RBP15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ELMOD3Q96FG2 381 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 REEP6Q96HR9 211 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SPACA5Q96QH8 159 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 NICN1Q9BSH3 213 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 GSX2Q9BZM3 304 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 KCNN3Q9UGI6 736 aa15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 MCTS1Q9ULC4 181 aaKnown RBP15.48■□□□□ 0.07
HLA-DQB1-204ENST00000399084 PINLYPA6NC86 204 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 KLRC4-KLRK1H3BQV0 150 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ERVH48-1M5A8F1 160 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 DUS4LO95620 317 aaKnown RBP15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 HLA-AP01891 365 aaKnown RBP15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 LCATP04180 440 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 COX5BP10606 129 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ZNF35P13682 527 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ZNF708P17019 499 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ITGA3P26006 1051 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 NTF4P34130 210 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 PSG4Q00888 419 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ARFRP1Q13795 201 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SURF2Q15527 256 aaPredicted RBP15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 C6orf183Q5T699 404 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 GVQW1Q8N7I0 195 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 FBXW5Q969U6 566 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 PRDM14Q9GZV8 571 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 METTL9Q9H1A3 318 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 HSF4Q9ULV5 492 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 EDARQ9UNE0 448 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 VSIG4Q9Y279 399 aa15.47■□□□□ 0.07
HLA-DQB1-204ENST00000399084 A0A0B4J2A0 478 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 A0A1W2PNU3 283 aaPredicted RBP15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 PMS2P1A4D2B8 440 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 MPC2O95563 127 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ACTL6AO96019 429 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SDHBP21912 280 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 HTR5AP47898 357 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SOX8P57073 446 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 IL13RA1P78552 427 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 EXOSC2Q13868 293 aaKnown RBP15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 RNPS1Q15287 305 aaKnown RBP15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 NKPD1Q17RQ9 610 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ZNF774Q6NX45 483 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 CRIP3Q6Q6R5 217 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 C3P1Q6ZMU1 363 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 DPPA2Q7Z7J5 298 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 GLRX5Q86SX6 157 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 OR8H3Q8N146 312 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ST8SIA4Q92187 359 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SPSB4Q96A44 273 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 BANF2Q9H503 90 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 BCO1Q9HAY6 547 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 ACKR4Q9NPB9 350 aa15.46■□□□□ 0.07
HLA-DQB1-204ENST00000399084 SHPKQ9UHJ6 478 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms