RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PRAMEF6Q5VXH4 476 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PIGCQ92535 297 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 GHSRQ92847 366 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ITFG2Q969R8 447 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SAP30LQ9HAJ7 183 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 HHLA2Q9UM44 414 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 IGKV1-9A0A0C4DH69 117 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MTRF1O75570 445 aaKnown RBP10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CD1AP06126 327 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 DAOP14920 347 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CELP19835 753 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CRYBB2P43320 205 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 HOXA4Q00056 320 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TPBGQ13641 420 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MPPED2Q15777 294 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 UBE2V2Q15819 145 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CEP78Q5JTW2 689 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 UBE2UQ5VVX9 321 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF367Q7RTV3 350 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 C11orf53Q8IXP5 236 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CCDC54Q8NEL0 328 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 WFDC11Q8NEX6 87 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 OR5P3Q8WZ94 311 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 FGGYQ96C11 551 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SLC22A4Q9H015 551 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 COMMD4Q9H0A8 199 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF696Q9H7X3 374 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 BARX1Q9HBU1 254 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ISYNA1Q9NPH2 558 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 GPR173Q9NS66 373 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF275Q9NSD4 429 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TREM2Q9NZC2 230 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 IL19Q9UHD0 177 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ENPP5Q9UJA9 477 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ITGB1BP2Q9UKP3 347 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF281Q9Y2X9 895 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MPC1Q9Y5U8 109 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MAP1AP78559 2803 aaPredicted RBP10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 DYSFO75923 2080 aa10.49□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ITPR3Q14573 2671 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 IGHV4-30-2A0A087WSY4 118 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TRIM64CA6NLI5 447 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CDC14BO60729 498 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TNFAIP8O95379 198 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 GATA4P43694 442 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SOX2P48431 317 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MRPS11P82912 194 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MLLT11Q13015 90 aaPredicted RBP10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 INSL4Q14641 139 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SSX1Q16384 188 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CLVS2Q5SYC1 327 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CRIP3Q6Q6R5 217 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PRSS57Q6UWY2 283 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 RNF144BQ7Z419 303 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZDHHC23Q8IYP9 409 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CELF2-AS1Q8N7Q2 184 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 OR13C3Q8NGS6 347 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF420Q8TAQ5 688 aaPredicted RBP10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 RDH5Q92781 318 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ORAI1Q96D31 301 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MGLLQ99685 303 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CHST5Q9GZS9 411 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 GCM1Q9NP62 436 aa10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SF3B6Q9Y3B4 125 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF469Q96JG9 3925 aaPredicted RBP10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 IGKV1-27A0A075B6S5 117 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 A0A096LNT2 108 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TRBV5-7A0A0A0MS05 114 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 IGHV1-69-2A0A0G2JMI3 117 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ANKRD61A6NGH8 418 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 VWC2LB2RUY7 222 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 C3orf80F5H4A9 247 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PIN1P1O15428 100 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TPD52L2O43399 206 aaKnown RBP10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SC5DO75845 299 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 INMTO95050 263 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 NRASP01111 189 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ERCC1P07992 297 aaPredicted RBP10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 HSMCR30P0CW71 290 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SMIM18P0DKX4 95 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CPEP16870 476 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF12P17014 697 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TNFSF4P23510 183 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 GNALP38405 381 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 RPS25P62851 125 aaKnown RBP10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF154Q13106 437 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 RIN1Q13671 783 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CLEC12BQ2HXU8 276 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CEACAM21Q3KPI0 293 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 FAM76BQ5HYJ3 339 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 LIPKQ5VXJ0 399 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PLCXD3Q63HM9 321 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF529Q6P280 563 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MOB3CQ70IA8 216 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MOGAT3Q86VF5 341 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PHC2Q8IXK0 858 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 FTMTQ8N4E7 242 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SVOPQ8N4V2 548 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PARP16Q8N5Y8 322 aa10.47□□□□□ -0.73
HLA-DQB1-203ENST00000399082 OR1M1Q8NGA1 313 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms