RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 ZNF404Q494X3 552 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 PRAMEF6Q5VXH4 476 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 FDX2Q6P4F2 183 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 DOK3Q7L591 496 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 ZDHHC23Q8IYP9 409 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 SYS1Q8N2H4 156 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 OR1M1Q8NGA1 313 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 OR5A2Q8NGI9 324 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 RORBQ92753 470 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 C10orf35Q96D05 121 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 JAM3Q9BX67 310 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 UFSP2Q9NUQ7 469 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 UBAP1Q9NZ09 502 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 GNG8Q9UK08 70 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 GTF2A1LQ9UNN4 478 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 V9GYS6 101 aa11.99□□□□□ -0.49
HDDC2-202ENST00000398153 TRAV38-1A0A0B4J264 116 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 OR5B21A6NL26 309 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 ZNF850A8MQ14 1090 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 F5H0A9 414 aaPredicted RBP11.98□□□□□ -0.49
HDDC2-202ENST00000398153 J3QLI3 93 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 MAGEB4O15481 346 aaPredicted RBP11.98□□□□□ -0.49
HDDC2-202ENST00000398153 RPP14O95059 124 aaKnown RBP11.98□□□□□ -0.49
HDDC2-202ENST00000398153 GRPP07492 148 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 UBCP0CG48 685 aaKnown RBP11.98□□□□□ -0.49
HDDC2-202ENST00000398153 CCR9P51686 369 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 FAM120AOSQ5T036 256 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 DCDC5Q6ZRR9 648 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 NLRC3Q7RTR2 1065 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 APH1BQ8WW43 257 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 CYGBQ8WWM9 190 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 PIGCQ92535 297 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 FAM71F1Q96KD3 344 aaPredicted RBP11.98□□□□□ -0.49
HDDC2-202ENST00000398153 ADI1Q9BV57 179 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 HIF1ANQ9NWT6 349 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 C1orf123Q9NWV4 160 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 SLC22A13Q9Y226 551 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 PIGLQ9Y2B2 252 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 LRCH1Q9Y2L9 728 aa11.98□□□□□ -0.49
HDDC2-202ENST00000398153 ABCA2Q9BZC7 2435 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 A0A0G2JMP0 313 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 A0A0X1KG70 313 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 A0A1B0GTI1 187 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 A0A1B0GVI7 797 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 A6NLC8 198 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 CEACAM18A8MTB9 384 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 A8MXK9 166 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 LGALS8O00214 317 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 PLPP2O43688 288 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 WBP4O75554 376 aaKnown RBP11.97□□□□□ -0.49
HDDC2-202ENST00000398153 ISG15P05161 165 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 WNT2P09544 360 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 FAM157CP0CG43 387 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 MUC1P15941 1255 aaPredicted RBP11.97□□□□□ -0.49
HDDC2-202ENST00000398153 DCKP27707 260 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 THBS2P35442 1172 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 GNG3P63215 75 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 ZNF154Q13106 437 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 CR1LQ2VPA4 569 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 C11orf91Q3C1V1 193 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 ESCO2Q56NI9 601 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 CLVS2Q5SYC1 327 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 TMEM244Q5VVB8 128 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 TMEM42Q69YG0 159 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 C11orf53Q8IXP5 236 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 OR4M2Q8NGB6 313 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 OR10Z1Q8NGY1 313 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 OR14K1Q8NGZ2 314 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 DVL3Q92997 716 aaPredicted RBP11.97□□□□□ -0.49
HDDC2-202ENST00000398153 RNF170Q96K19 258 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 TECTBQ96PL2 329 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 TMEM246Q9BRR3 403 aa11.97□□□□□ -0.49
HDDC2-202ENST00000398153 FGF20Q9NP95 211 aaPredicted RBP11.97□□□□□ -0.49
HDDC2-202ENST00000398153 IGHV3-64DA0A0J9YX35 117 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 hCG_1807616A0A1W2PRN6 198 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 OOEPA6NGQ2 149 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 ERICH4A6NGS2 130 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 SYT7O43581 403 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 NRASP01111 189 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 IFNA2P01563 188 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 CAPGP40121 348 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 NPY4RP50391 375 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 TP53I3Q53FA7 332 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 TEX36Q5VZQ5 186 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 WDR82Q6UXN9 313 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 WDR86Q86TI4 376 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 C8orf59Q8N0T1 100 aaPredicted RBP11.96□□□□□ -0.49
HDDC2-202ENST00000398153 GCSAMQ8N6F7 178 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 OR2G2Q8NGZ5 317 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 PPP1R14AQ96A00 147 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 C12orf43Q96C57 262 aaKnown RBP11.96□□□□□ -0.49
HDDC2-202ENST00000398153 NEIL1Q96FI4 390 aaPredicted RBP11.96□□□□□ -0.49
HDDC2-202ENST00000398153 ALG8Q9BVK2 526 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 AMBNQ9NP70 447 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 ACOXLQ9NUZ1 547 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 ERVK13-1Q9NX77 482 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 AASSQ9UDR5 926 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 MYRFQ9Y2G1 1151 aa11.96□□□□□ -0.49
HDDC2-202ENST00000398153 SONP18583 2426 aaKnown RBP11.96□□□□□ -0.5
HDDC2-202ENST00000398153 P2RY10O00398 339 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms