RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ZNF774Q6NX45 483 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 DNAAF1Q8NEP3 725 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 AKR7LQ8NHP1 331 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 PPP1R14AQ96A00 147 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 OR2A7Q96R45 310 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 CITED4Q96RK1 184 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 WNT5BQ9H1J7 359 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 METTL17Q9H7H0 456 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 MRPL15Q9P015 296 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 OR52A1Q9UKL2 312 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 FLVCR2Q9UPI3 526 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 DOCK7Q96N67 2140 aa16.83■□□□□ 0.28
PDLIM2-204ENST00000397760 GGT3PA6NGU5 568 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 G3V3Q6 166 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 SLC17A2O00624 439 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 LYZL6O75951 148 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 HLA-HP01893 362 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 RBMS2Q15434 407 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 ODF4Q2M2E3 257 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 HIKESHIQ53FT3 197 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 CLLU1Q5K131 121 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 Q6ZTK2 550 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 ASB13Q8WXK3 278 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 FAM206AQ9NX38 181 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 ACACBO00763 2458 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 CIB4A0PJX0 185 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 SULT1C2O00338 296 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 SYNGR3O43761 229 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 MAS1P04201 325 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 CD79AP11912 226 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 FSTP19883 344 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF81P51508 661 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 AP2S1P53680 142 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 PSMA6P60900 246 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 FAM166AQ6J272 317 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 GABRG1Q8N1C3 465 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF283Q8N7M2 679 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 OR1F12Q8NHA8 337 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 GCDHQ92947 438 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 G6PC2Q9NQR9 355 aa16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 EIF3KQ9UBQ5 218 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-204ENST00000397760 PKD1L2Q7Z442 2459 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 TRGV8A0A0C4DH27 118 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 LOC100289279A0A1B0GTE1 492 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 F5H5K5 113 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 CTAG2O75638 210 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 RAD51DO75771 328 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 COX5AP20674 150 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 CX3CR1P49238 355 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 CASP6P55212 293 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 ECH1Q13011 328 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 RAB11BQ15907 218 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 RSPO1Q2MKA7 263 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 PABPC1L2AQ5JQF8 200 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 BEND4Q6ZU67 534 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 TSEN15Q8WW01 171 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 UBQLN2Q9UHD9 624 aa16.81■□□□□ 0.28
PDLIM2-204ENST00000397760 TPRP12270 2363 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 A0A0G2JNJ9 132 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 MEGF11A6BM72 1044 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF503-AS2A6NEH8 195 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 OPRM1P35372 400 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 RAD52P43351 418 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 HTR5AP47898 357 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 CAPZA1P52907 286 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 ZNF121P58317 390 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 CCDC28AQ8IWP9 274 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 SPTSSAQ969W0 71 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 PBOV1Q9GZY1 135 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 MGAT4CQ9UBM8 478 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 Q9UFV3 132 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 A0A0A6YYH2 397 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 OR6C6A6NF89 314 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 A6NJ64 397 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 E9PLN8 166 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 SHOXO15266 292 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 ALDOBP05062 364 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 CD2P06729 351 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 MELTFP08582 738 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 DBHP09172 617 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 SLC2A1P11166 492 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 OTX1P32242 354 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 ARR3P36575 388 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 RAB1AP62820 205 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 GRK1Q15835 563 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 GABRA6Q16445 453 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 GLT8D1Q68CQ7 371 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 DPPA2Q7Z7J5 298 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 CXorf67Q86X51 503 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 OR8H3Q8N146 312 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 OR51A4Q8NGJ6 313 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 OR10AC1Q8NH08 325 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 NANOS1Q8WY41 292 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 VKORC1Q9BQB6 163 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 PIPOXQ9P0Z9 390 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 CKLFQ9UBR5 152 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 MAB21L2Q9Y586 359 aa16.8■□□□□ 0.28
PDLIM2-204ENST00000397760 ARHGAP21Q5T5U3 1957 aa16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 NCOA6Q14686 2063 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-204ENST00000397760 UBE2QL1A1L167 161 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms