RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 SAR1AQ9NR31 198 aa5.68□□□□□ -1.5
SMCO1-201ENST00000397537 SLC17A6Q9P2U8 582 aa5.68□□□□□ -1.5
SMCO1-201ENST00000397537 PRODH2Q9UF12 536 aa5.68□□□□□ -1.5
SMCO1-201ENST00000397537 C19orf25Q9UFG5 118 aaPredicted RBP5.68□□□□□ -1.5
SMCO1-201ENST00000397537 ZNF107Q9UII5 783 aaPredicted RBP5.68□□□□□ -1.5
SMCO1-201ENST00000397537 RAB26Q9ULW5 256 aa5.68□□□□□ -1.5
SMCO1-201ENST00000397537 HSPE1-MOB4S4R3N1 261 aa5.68□□□□□ -1.5
SMCO1-201ENST00000397537 TRIOO75962 3097 aa5.68□□□□□ -1.5
SMCO1-201ENST00000397537 PLXNA3P51805 1871 aa5.68□□□□□ -1.5
SMCO1-201ENST00000397537 WDR87Q6ZQQ6 2873 aa5.68□□□□□ -1.5
SMCO1-201ENST00000397537 IGHV4-28A0A0C4DH34 117 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 A0A0G2JMP0 313 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 A0A1B0GV72 72 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 A0A1W2PR80 420 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 KRBOX1C9JBD0 128 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 CXCR6O00574 342 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 SCO1O75880 301 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 HOXB7P09629 217 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 EFNA1P20827 205 aaPredicted RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 IL12AP29459 219 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ERP29P30040 261 aaKnown RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 SSTR4P31391 388 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 SEMG2Q02383 582 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ACVR1Q04771 509 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 GTF2H2Q13888 395 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 TRIP6Q15654 476 aaKnown RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 CDNFQ49AH0 187 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 FAM106AQ4KMX7 169 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ATP1A1-AS1Q5TC04 95 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 PVRIGQ6DKI7 326 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 OR8G2PQ6IF36 304 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 GTF2H2CQ6P1K8 395 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 DCUN1D2Q6PH85 259 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ZNF782Q6ZMW2 699 aaPredicted RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 MRPL52Q86TS9 123 aaKnown RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 TMEM219Q86XT9 240 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 RIMKLAQ8IXN7 391 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 EID2Q8N6I1 236 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 SYNPRQ8TBG9 265 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 TFB1MQ8WVM0 346 aaKnown RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 SMIM19Q96E16 107 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ZHX1-C8orf76Q96EF9 292 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 DYNLL2Q96FJ2 89 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 DDA1Q9BW61 102 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ARL6Q9H0F7 186 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 KRCC1Q9NPI7 259 aaPredicted RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ZNF224Q9NZL3 707 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 COPZ2Q9P299 210 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 Q9UF83 564 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 FRMPD3Q5JV73 1810 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ZNF503-AS2A6NEH8 195 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 GAGE12JA6NER3 117 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 TMX2-CTNND1H3BSU7 103 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 KPNA3O00505 521 aaPredicted RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 CTSVO60911 334 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ZNF780AO75290 641 aaPredicted RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 WNT2P09544 360 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 IGFBP3P17936 291 aaPredicted RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 SPINK2P20155 84 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 FUT3P21217 361 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 CA5AP35218 305 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 CEACAM6P40199 344 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ARL16Q0P5N6 197 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 GUSBP1Q15486 140 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 GRK1Q15835 563 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 PSMD5Q16401 504 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 CD200R1LQ6Q8B3 271 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 GFRALQ6UXV0 394 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 BHLHA9Q7RTU4 235 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 FBXL14Q8N1E6 418 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ZNF843Q8N446 348 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 SFT2D1Q8WV19 159 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 TBX15Q96SF7 602 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 SDHCQ99643 169 aaPredicted RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 DOK1Q99704 481 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 UGT2B28Q9BY64 529 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ACTR6Q9GZN1 396 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 NUDT4Q9NZJ9 180 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 TRMT112Q9UI30 125 aaKnown RBP5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ZNF225Q9UK10 706 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 ARL5AQ9Y689 179 aa5.67□□□□□ -1.5
SMCO1-201ENST00000397537 A0A0G2JMZ2 1700 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 RLFQ13129 1914 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 A0A0X1KG70 313 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 PSMD12O00232 456 aaPredicted RBP5.66□□□□□ -1.5
SMCO1-201ENST00000397537 CCL21O00585 134 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 CDIPTO14735 213 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 ERI3O43414 337 aaKnown RBP5.66□□□□□ -1.5
SMCO1-201ENST00000397537 SPRY3O43610 288 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 FADS1O60427 444 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 RAD1O60671 282 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 EEDO75530 441 aaKnown RBP5.66□□□□□ -1.5
SMCO1-201ENST00000397537 TSPAN15O95858 294 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 PTTG1O95997 202 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 ISG15P05161 165 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 UCHL3P15374 230 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 ZFP36L2P47974 494 aaKnown RBP5.66□□□□□ -1.5
SMCO1-201ENST00000397537 PSMD8P48556 350 aa5.66□□□□□ -1.5
SMCO1-201ENST00000397537 STC1P52823 247 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms