RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 MRPL13Q9BYD1 178 aaKnown RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 CHST11Q9NPF2 352 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 SOHLH2Q9NX45 425 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 PLA2G2EQ9NZK7 142 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 SEMA5BQ9P283 1151 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 SEC16AO15027 2179 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 PCNX3Q9H6A9 2034 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 A0A1W2PNV4 684 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 C5orf52A6NGY3 159 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 C9JQL5 133 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 CST4P01036 141 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 SMIM6P0DI80 62 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF17P17021 662 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 APOBEC1P41238 236 aaKnown RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 DVL1P1P54792 670 aaPredicted RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 F2RL1P55085 397 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 POU3F1Q03052 451 aaPredicted RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 CFHR1Q03591 330 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 HGFACQ04756 655 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 PEAR1Q5VY43 1037 aaPredicted RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 TTLL10Q6ZVT0 673 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 SLC29A4Q7RTT9 530 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 PLXDC1Q8IUK5 500 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 OR10H5Q8NGA6 315 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 OR5H2Q8NGV7 314 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 EMG1Q92979 244 aaKnown RBP11.75□□□□□ -0.53
TRIM40-207ENST00000396581 TMEM41AQ96HV5 264 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 DUSP23Q9BVJ7 150 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 TMEM59Q9BXS4 323 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 MED29Q9NX70 200 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 CACFD1Q9UGQ2 172 aa11.75□□□□□ -0.53
TRIM40-207ENST00000396581 VPS13AQ96RL7 3174 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 RP1P56715 2156 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 ETV2O00321 342 aaPredicted RBP11.74□□□□□ -0.53
TRIM40-207ENST00000396581 UBE2CO00762 179 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF354AO60765 605 aaPredicted RBP11.74□□□□□ -0.53
TRIM40-207ENST00000396581 MED6O75586 246 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 MPIG6BO95866 241 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 S100A8P05109 93 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF20P17024 532 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 PTAFRP25105 342 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 LAP3P28838 519 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 EPHA8P29322 1005 aaPredicted RBP11.74□□□□□ -0.53
TRIM40-207ENST00000396581 PMELP40967 661 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 OR3A4PP47883 348 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 RAB5BP61020 215 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 SPEM2Q0P670 501 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 TSC22D1Q15714 1073 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 SWI5Q1ZZU3 235 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 DHRS11Q6UWP2 260 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 OR51E1Q8TCB6 317 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 CNTNAP3Q9BZ76 1288 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 TUBA4BQ9H853 241 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 OR2S2Q9NQN1 319 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 PRR13Q9NZ81 148 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 COPS7AQ9UBW8 275 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 TTC28Q96AY4 2481 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF878C9JN71 531 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 DUX1O43812 170 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF708P17019 499 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 ALDH3B1P43353 468 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 UCP2P55851 309 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 SUMO3P55854 103 aaPredicted RBP11.74□□□□□ -0.53
TRIM40-207ENST00000396581 FAM3AP98173 230 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 TLE3Q04726 772 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 HMGN3Q15651 99 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 WDR74Q6RFH5 385 aaPredicted RBP11.74□□□□□ -0.53
TRIM40-207ENST00000396581 ZFP82Q8N141 532 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 SAP25Q8TEE9 199 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 ARHGAP5-AS1Q96IT6 56 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 KIRREL1Q96J84 757 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 METTL8Q9H825 291 aaKnown RBP11.74□□□□□ -0.53
TRIM40-207ENST00000396581 ZMAT5Q9UDW3 170 aaKnown RBP11.74□□□□□ -0.53
TRIM40-207ENST00000396581 B3GALT5Q9Y2C3 310 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 MEMO1Q9Y316 297 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 STARD10Q9Y365 291 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 KPTNQ9Y664 436 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 LHFPL6Q9Y693 200 aa11.74□□□□□ -0.53
TRIM40-207ENST00000396581 LINC01387J3KSC0 135 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 PNLIPP16233 465 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 RCC1P18754 421 aaPredicted RBP11.73□□□□□ -0.53
TRIM40-207ENST00000396581 PI3P19957 117 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 ADH6P28332 368 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 PPM1FP49593 454 aaPredicted RBP11.73□□□□□ -0.53
TRIM40-207ENST00000396581 TAS2R46P59540 309 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 HLA-BQ31612 363 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 THEM4Q5T1C6 240 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 CPNE2Q96FN4 548 aaPredicted RBP11.73□□□□□ -0.53
TRIM40-207ENST00000396581 SULT4A1Q9BR01 284 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 URM1Q9BTM9 101 aaKnown RBP11.73□□□□□ -0.53
TRIM40-207ENST00000396581 ARV1Q9H2C2 271 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 B3GAT1Q9P2W7 334 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 GHRLQ9UBU3 117 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 TUBD1Q9UJT1 453 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 DMDP11532 3685 aa11.73□□□□□ -0.53
TRIM40-207ENST00000396581 A0A1W2PP11 408 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 LIPT2A6NK58 231 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 CA11O75493 328 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms