RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 NKX2-2O95096 273 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 S100A8P05109 93 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 GABRG2P18507 467 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 NDUFA6P56556 154 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 AGERQ15109 404 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ZFP62Q8NB50 900 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TP53I13Q8NBR0 393 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM30AQ9NV96 361 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 EPPINO95925 133 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 APEHP13798 732 aaKnown RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF766Q5HY98 468 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 PAQR6Q6TCH4 344 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TCTE3Q8IZS6 198 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 HGDQ93099 445 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 SAT2Q96F10 170 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 AAMDCQ9H7C9 122 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ASB1Q9Y576 335 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 GREB1Q4ZG55 1949 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 SH2D7A6NKC9 451 aaPredicted RBP4.9□□□□□ -1.62
VPS13C-204ENST00000395898 PRR35P0CG20 571 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 FGF9P31371 208 aaPredicted RBP4.9□□□□□ -1.62
VPS13C-204ENST00000395898 KIR2DS2P43631 304 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 HAGHQ16775 308 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 C4orf17Q53FE4 359 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 SOWAHCQ53LP3 525 aaPredicted RBP4.9□□□□□ -1.62
VPS13C-204ENST00000395898 BAP18Q8IXM2 172 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM104Q8NE00 496 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 LHX4Q969G2 390 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 TVP23CQ96ET8 276 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 RNF167Q9H6Y7 350 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 CYB5R1Q9UHQ9 305 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 V9GYS6 101 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 TRGV8A0A0C4DH27 118 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 COX7A2P2O60397 106 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 TBX19O60806 448 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 FUT3P21217 361 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 CD80P33681 288 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 RAG2P55895 527 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 DGCR2P98153 550 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 TOR2AQ5JU69 321 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 OR2W3Q7Z3T1 314 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 CALHM3Q86XJ0 350 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 OR2Z1Q8NG97 314 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 MARCH1Q8TCQ1 289 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 YIPF6Q96EC8 236 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 CABLES2Q9BTV7 478 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 C20orf24Q9BUV8 137 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 SIGLEC7Q9Y286 467 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 BRWD3Q6RI45 1802 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 ADAMTS7Q9UKP4 1686 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 PARP14Q460N5 1801 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 RALGAPA2Q2PPJ7 1873 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 SDCBPO00560 298 aaPredicted RBP4.9□□□□□ -1.62
VPS13C-204ENST00000395898 NDUFB3O43676 98 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 ALX3O95076 343 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 IL5P05113 134 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 CEACAM16Q2WEN9 425 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM211Q6ICI0 200 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 KLHDC1Q8N7A1 406 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 NPEPL1Q8NDH3 523 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 OR5M8Q8NGP6 311 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 OR13G1Q8NGZ3 307 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM230Q96A57 120 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 PRDM7Q9NQW5 492 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 ALG1L2C9J202 215 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 B4GALT3O60512 393 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 CYTIPO60759 359 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 CRYBA1P05813 215 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 SULT1A3P0DMM9 295 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 SULT1A4P0DMN0 295 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 B4GALT1P15291 398 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 RAB7AP51149 207 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 OR1C1Q15619 314 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 HFEQ30201 348 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 MOB1BQ7L9L4 216 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 NUFIP2Q7Z417 695 aaKnown RBP4.9□□□□□ -1.62
VPS13C-204ENST00000395898 SPACA5Q96QH8 159 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 ARHGDIGQ99819 225 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 OR51I2Q9H344 312 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 CYSLTR2Q9NS75 346 aa4.9□□□□□ -1.62
VPS13C-204ENST00000395898 AMMECR1Q9Y4X0 333 aaPredicted RBP4.9□□□□□ -1.62
VPS13C-204ENST00000395898 SERTM2A0A1B0GWG4 89 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 GPR31O00270 319 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 SLC31A2O15432 143 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 LIMS3P0CW19 117 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 LIMS4P0CW20 117 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 BAMBIQ13145 260 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 GPNMBQ14956 572 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 KISS1Q15726 138 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 ZNF787Q6DD87 383 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 CA5BP1Q8WTZ4 195 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 FYTTD1Q96QD9 318 aaKnown RBP4.9□□□□□ -1.63
VPS13C-204ENST00000395898 OR8B4Q96RC9 309 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 R3HDMLQ9H3Y0 253 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 MMP25Q9NPA2 562 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 FBXO34Q9NWN3 711 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 TIMM9Q9Y5J7 89 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 G3V3Q6 166 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 SLC25A6P12236 298 aa4.9□□□□□ -1.63
VPS13C-204ENST00000395898 INSM1Q01101 510 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms