RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CXCL13O43927 109 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 TRAPPC6AO75865 159 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 SLC6A9P48067 706 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 AKIRIN2Q53H80 203 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 FAM27BQ5VT28 67 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 CDCP2Q5VXM1 449 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 TRAPPC6BQ86SZ2 158 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 ZNF101Q8IZC7 436 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 BVESQ8NE79 360 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 OR10D3Q8NH80 312 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 THOC3Q96J01 351 aaKnown RBP12.23□□□□□ -0.45
SNCA-204ENST00000394989 CRLF2Q9HC73 371 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 KCNK7Q9Y2U2 307 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 OR14I1A6ND48 311 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 KRBOX1C9JBD0 128 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 TERTO14746 1132 aaKnown RBP12.23□□□□□ -0.45
SNCA-204ENST00000394989 SSX5O60225 188 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 RLN2P04090 185 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 GFRA1P56159 465 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 MRPS34P82930 218 aaKnown RBP12.23□□□□□ -0.45
SNCA-204ENST00000394989 PLAC9Q5JTB6 97 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 ZNF584Q8IVC4 421 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 INTS12Q96CB8 462 aaKnown RBP12.23□□□□□ -0.45
SNCA-204ENST00000394989 SELENOIQ9C0D9 397 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 ZMAT5Q9UDW3 170 aaKnown RBP12.23□□□□□ -0.45
SNCA-204ENST00000394989 FRYQ5TBA9 3013 aa12.23□□□□□ -0.45
SNCA-204ENST00000394989 A0A0U1RQV5 110 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 NEURL1O76050 574 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 HCKP08631 526 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 NKPD1Q17RQ9 610 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 SNAI3Q3KNW1 292 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 DCAF12L2Q5VW00 463 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 PDZD9Q8IXQ8 264 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 BPIFB2Q8N4F0 458 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 CLRN3Q8NCR9 226 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 EDEM2Q9BV94 578 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 ALX4Q9H161 411 aaPredicted RBP12.22□□□□□ -0.45
SNCA-204ENST00000394989 BANF2Q9H503 90 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 PLEK2Q9NYT0 353 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 KIF25Q9UIL4 384 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 V9GYS6 101 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 CDC14BO60729 498 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 F12P00748 615 aaPredicted RBP12.22□□□□□ -0.45
SNCA-204ENST00000394989 CSN2P05814 226 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 GDF1P27539 372 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 S100A11P31949 105 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 CD96P40200 585 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 UBE2V2Q15819 145 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 ATPAF1Q5TC12 328 aaPredicted RBP12.22□□□□□ -0.45
SNCA-204ENST00000394989 ABLIM2Q6H8Q1 611 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 TMUB2Q71RG4 321 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 C1QL2Q7Z5L3 287 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 CD163Q86VB7 1156 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 OR2AK2Q8NG84 335 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 ZNF845Q96IR2 970 aaPredicted RBP12.22□□□□□ -0.45
SNCA-204ENST00000394989 SIGLEC12Q96PQ1 595 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 ALKBH3Q96Q83 286 aaPredicted RBP12.22□□□□□ -0.45
SNCA-204ENST00000394989 LRFN1Q9P244 771 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 OPN4Q9UHM6 478 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 R4GN57 208 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 PLSCR5A0PG75 271 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 TMEM82A0PJX8 343 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 H7C2Y5 167 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 M0R135 149 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 DNASE2O00115 360 aaPredicted RBP12.22□□□□□ -0.45
SNCA-204ENST00000394989 SOCS1O15524 211 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 NDUFA2O43678 99 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 CBR1P16152 277 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 DLSTP36957 453 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 ZNF84P51523 738 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 DHODHQ02127 395 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 HGFACQ04756 655 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 Q6ZSR3 168 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 PNPLA2Q96AD5 504 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 ZNF799Q96GE5 643 aa12.22□□□□□ -0.45
SNCA-204ENST00000394989 SLC25A21Q9BQT8 299 aaPredicted RBP12.22□□□□□ -0.45
SNCA-204ENST00000394989 NUDT16L1Q9BRJ7 211 aaKnown RBP12.22□□□□□ -0.45
SNCA-204ENST00000394989 RYDENQ9NUL5 291 aaKnown RBP12.22□□□□□ -0.45
SNCA-204ENST00000394989 UBE2QL1A1L167 161 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 DHRS3O75911 302 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 OR4E1P0C645 316 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 ZNF35P13682 527 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 FAHP16930 419 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 CRYGSP22914 178 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 TMEM50BP56557 158 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 RAP2BP61225 183 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 C4orf46Q504U0 113 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.21□□□□□ -0.45
SNCA-204ENST00000394989 OR2W3Q7Z3T1 314 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 OR5D18Q8NGL1 313 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 NPRL2Q8WTW4 380 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 LOXL4Q96JB6 756 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 HES7Q9BYE0 225 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 MRPS18CQ9Y3D5 142 aaKnown RBP12.21□□□□□ -0.45
SNCA-204ENST00000394989 MYO7BQ6PIF6 2116 aa12.21□□□□□ -0.45
SNCA-204ENST00000394989 B3GALNT1O75752 331 aa12.21□□□□□ -0.46
SNCA-204ENST00000394989 MPIG6BO95866 241 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms