RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PCBP3P57721 371 aaKnown RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 CLEC18CQ8NCF0 446 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 OTOSQ8NHW6 89 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PP6455Q8WZ26 134 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 MED30Q96HR3 178 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 FLVCR2Q9UPI3 526 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PPIL1Q9Y3C6 166 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 COL22A1Q8NFW1 1626 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 UMAD1C9J7I0 102 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 HOXC4P09017 264 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 SOX8P57073 446 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 TNFAIP6P98066 277 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 ZNF239Q16600 458 aaKnown RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 ZNF707Q96C28 371 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PLEKHA2Q9HB19 425 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 TAAR3PQ9P1P4 343 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 RCL1Q9Y2P8 373 aaKnown RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 NUDT19A8MXV4 375 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PPP1R2P9O14990 202 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 MLF1P58340 268 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PNLIPRP3Q17RR3 467 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 TMEM215Q68D42 235 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PWWP2BQ6NUJ5 590 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 ZNF793Q6ZN11 406 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PRSS41Q7RTY9 318 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 KIAA1958Q8N8K9 716 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 LHX4Q969G2 390 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 C2orf50Q96LR7 162 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 RAB1BQ9H0U4 201 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 CBY1Q9Y3M2 126 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 H7BYZ3 331 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 SMIM18P0DKX4 95 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PCBP4P57723 403 aaKnown RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 RAE1P78406 368 aaKnown RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PRICKLE4Q2TBC4 344 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 SPINK14Q6IE38 97 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 RPUSD3Q6P087 351 aaKnown RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 ABI3BPQ7Z7G0 1075 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 RPUSD4Q96CM3 377 aaKnown RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 FGF20Q9NP95 211 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-203ENST00000394872 GOLT1BQ9Y3E0 138 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 ZNF727A8MUV8 499 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PDCD1Q15116 288 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 H3F3CQ6NXT2 135 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 LYG2Q86SG7 212 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 GPR32P1Q8NGA4 272 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 OR4S1Q8NGB4 309 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 OR13G1Q8NGZ3 307 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 MISP3Q96FF7 219 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 LRFN3Q9BTN0 628 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 LHX9Q9NQ69 397 aa9.31□□□□□ -0.92
COL4A6-203ENST00000394872 DBX1A6NMT0 343 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 AKR1C3P42330 323 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 KLF3P57682 345 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 TM4SF19Q96DZ7 209 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 DUS3LQ96G46 650 aaKnown RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 OCIAD1Q9NX40 245 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 MYH14Q7Z406 1995 aaKnown RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 A0A1B0GTL3 188 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 NKX2-2O95096 273 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 TAGLNQ01995 201 aaKnown RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 FMODQ06828 376 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 FAHD1Q6P587 224 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 RTN4IP1Q8WWV3 396 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 FAM103A1Q9BTL3 118 aaKnown RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 AUNIPQ9H7T9 357 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 RYDENQ9NUL5 291 aaKnown RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 AKAP11Q9UKA4 1901 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 DEFB108AA8MXU0 73 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 H3BMH7 237 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 ADAM10O14672 748 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 GPANK1O95872 356 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 CEACAM6P40199 344 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 TOMM34Q15785 309 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 PXDC1Q5TGL8 231 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 BTNL3Q6UXE8 466 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 OR10Z1Q8NGY1 313 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 TMED6Q8WW62 240 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 MCHR2Q969V1 340 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 DOK1Q99704 481 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 A0A0B4J2E0 115 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 A0A1B0GX12 115 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 SERPINE3A8MV23 424 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 CDX4O14627 284 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 ZNF354AO60765 605 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 PDGFBP01127 241 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 NGFP01138 241 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 C1QBP02746 253 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 KIAA0141Q14154 515 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 TIGD3Q6B0B8 471 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 ZNF774Q6NX45 483 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 OR52N4Q8NGI2 321 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 OR8B4Q96RC9 309 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 MMP25Q9NPA2 562 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 PLEKHB1Q9UF11 243 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 LRRC3CA6NJW4 275 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 RRASP10301 218 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 FUT3P21217 361 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 COX7A1P24310 79 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms