RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TGFAP01135 160 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 UBCP0CG48 685 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 FAHP16930 419 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 CCL1P22362 96 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 MDH2P40926 338 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 MRPL28Q13084 256 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 MED21Q13503 144 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 TMEM155Q4W5P6 130 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 TMEM244Q5VVB8 128 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 Q6ZSR3 168 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 KCTD8Q6ZWB6 473 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 MOB3CQ70IA8 216 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 SPICQ8N5J4 248 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 OR1M1Q8NGA1 313 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 FBLIM1Q8WUP2 373 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 GGHQ92820 318 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 RNF166Q96A37 237 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 TMEM80Q96HE8 168 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 RNF170Q96K19 258 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 ZNF649Q9BS31 505 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 ISG20L2Q9H9L3 353 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 CHCHD3Q9NX63 227 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 UBAP1Q9NZ09 502 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 FRRS1LQ9P0K9 344 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 PCDHB10Q9UN67 800 aa15.98■□□□□ 0.15
PDLIM7-204ENST00000393546 PPIAL4EA0A075B759 164 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 EFCAB10A6NFE3 127 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 TMEM210A6NLX4 147 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 A8MV72 311 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 B4DSR2 109 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 PPIAL4DF5H284 164 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 NRASP01111 189 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 LIMS3P0CW19 117 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 LIMS4P0CW20 117 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 PPIAL4FP0DN26 164 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 ZNF12P17014 697 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 ZNF16P17020 682 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 KIR3DL2P43630 455 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 CCR9P51686 369 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 GBX2P52951 348 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 CDH15P55291 814 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 ZMYND11Q15326 602 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 CLVS2Q5SYC1 327 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 FAM166AQ6J272 317 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 MUC20Q8N307 709 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 KLHL36Q8N4N3 616 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 BPIFB6Q8NFQ5 453 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 HAVCR2Q8TDQ0 301 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 PLCXD1Q9NUJ7 323 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 DIMT1Q9UNQ2 313 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 EXOSC1Q9Y3B2 195 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 PPIAL4AQ9Y536 164 aa15.97■□□□□ 0.15
PDLIM7-204ENST00000393546 hCG_1807616A0A1W2PRN6 198 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 ZNF205O95201 554 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 FSTL3O95633 263 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 IGHV2-5P01817 119 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 MYL12AP19105 171 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 ETV1P50549 477 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 NANOS3P60323 173 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 CSNK2BP67870 215 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 ALKBH1Q13686 389 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 CEACAM21Q3KPI0 293 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 CEP78Q5JTW2 689 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 LAIR2Q6ISS4 152 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 TMPRSS11AQ6ZMR5 421 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 ZNF826PQ6ZT77 177 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 RDH10Q8IZV5 341 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 OR5A2Q8NGI9 324 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 TMEM165Q9HC07 324 aa15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 CNOT2Q9NZN8 540 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 CAB39Q9Y376 341 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-204ENST00000393546 FAM157AC9JC47 383 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 H3BSH0 61 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 XPNPEP2O43895 674 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 LMX1BO60663 402 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 ISG15P05161 165 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 PIPP12273 146 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 THBS2P35442 1172 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 HSPA13P48723 471 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 GNG3P63215 75 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 ST3GAL4Q11206 333 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 ZNF154Q13106 437 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 FAM201AQ5SY85 155 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 PLCXD3Q63HM9 321 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 IZUMO2Q6UXV1 221 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 WDR86Q86TI4 376 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 C11orf53Q8IXP5 236 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 BOLLQ8N9W6 283 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 HPSE2Q8WWQ2 592 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 PLEKHA1Q9HB21 404 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 PATZ1Q9HBE1 687 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 PSORS1C1Q9UIG5 152 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 KCNS2Q9ULS6 477 aa15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 RRP15Q9Y3B9 282 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-204ENST00000393546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.95■□□□□ 0.142e-7■■■□□ 18.1
PDLIM7-204ENST00000393546 MALRD1Q5VYJ5 2156 aa15.94■□□□□ 0.14
PDLIM7-204ENST00000393546 LOC107986453A0A1B0GWG9 222 aa15.94■□□□□ 0.14
PDLIM7-204ENST00000393546 A6NIN4 97 aa15.94■□□□□ 0.14
PDLIM7-204ENST00000393546 OR5B21A6NL26 309 aa15.94■□□□□ 0.14
PDLIM7-204ENST00000393546 ZNF732B4DXR9 585 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms