RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 DUX4L9Q6RFH8 374 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 WDR82Q6UXN9 313 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 CATSPERDQ86XM0 798 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 KLBQ86Z14 1044 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZDHHC23Q8IYP9 409 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 ELMOD2Q8IZ81 293 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 C1orf87Q8N0U7 546 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 BATF2Q8N1L9 274 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 MUC20Q8N307 709 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 PRSS35Q8N3Z0 413 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 FGFRL1Q8N441 504 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 GCSAMQ8N6F7 178 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 CSNK2A3Q8NEV1 391 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 SEMA6DQ8NFY4 1073 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR2T27Q8NH04 317 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 LRRC29Q8WV35 223 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 TRUB1Q8WWH5 349 aaKnown RBP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 CYGBQ8WWM9 190 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR5P3Q8WZ94 311 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 LGALS12Q96DT0 336 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 MNTQ99583 582 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 MDFIQ99750 246 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 MICU1Q9BPX6 476 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMPRSS13Q9BYE2 586 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 RASSF4Q9H2L5 321 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 GPR173Q9NS66 373 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 C14orf119Q9NWQ9 140 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 SMPD3Q9NY59 655 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 CTSZQ9UBR2 303 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 DUX4Q9UBX2 424 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 LPAR3Q9UBY5 353 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 PIGLQ9Y2B2 252 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 MYRFQ9Y2G1 1151 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 NOP16Q9Y3C1 178 aaKnown RBP6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 SNX5Q9Y5X3 404 aa6.41□□□□□ -1.38
HMGB3P1-201ENST00000393368 YLPM1P49750 1951 aaKnown RBP6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 A0A0G2JMP0 313 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 A0A0X1KG70 313 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF816-ZNF321PA0A0X1KG74 233 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 DAPL1A0PJW8 107 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 OOEPA6NGQ2 149 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 ANXA2P2A6NMY6 339 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 IFNL4K9M1U5 179 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 FCN3O75636 299 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 RHBDL1O75783 438 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 CST4P01036 141 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 WNT2P09544 360 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 DBTP11182 482 aaKnown RBP6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 KIR3DL2P43630 455 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 MAP2K3P46734 347 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 GPM6AP51674 278 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR12D2P58182 307 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 NANOS3P60323 173 aaKnown RBP6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 IL5RAQ01344 420 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 RIPPLY1Q0D2K3 151 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMED1Q13445 227 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 ESCO2Q56NI9 601 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 SLC25A30Q5SVS4 291 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 DCAF12L2Q5VW00 463 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 MEDAGQ5VYS4 303 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 PLCXD3Q63HM9 321 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 MOB3CQ70IA8 216 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAM220AQ7Z4H9 259 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 THAP5Q7Z6K1 395 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 LHFPL3Q86UP9 236 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAM90A1Q86YD7 464 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 RDH10Q8IZV5 341 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 SPERTQ8NA61 448 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 SCCPDHQ8NBX0 429 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR4M2Q8NGB6 313 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR14K1Q8NGZ2 314 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 RHOXF1Q8NHV9 184 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 CNIH3Q8TBE1 160 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 ERGIC1Q969X5 290 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 RNF170Q96K19 258 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 RTL8AQ9BWD3 113 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 SSBP3Q9BWW4 388 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 WDR13Q9H1Z4 485 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 MOB1AQ9H8S9 216 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 ISG20L2Q9H9L3 353 aaKnown RBP6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 SMURF1Q9HCE7 757 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 SNTG1Q9NSN8 517 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 NKX1-2Q9UD57 310 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 OPN4Q9UHM6 478 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 MPC1Q9Y5U8 109 aa6.4□□□□□ -1.38
HMGB3P1-201ENST00000393368 DYSFO75923 2080 aa6.4□□□□□ -1.39
HMGB3P1-201ENST00000393368 MXRA5Q9NR99 2828 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 IGHV3OR16-10A0A075B7F0 116 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 LOC107986453A0A1B0GWG9 222 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ACOD1A6NK06 481 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZNF732B4DXR9 585 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 J3QLW9 94 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 LGALS8O00214 317 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 SLC16A6O15403 523 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 AKR7A2O43488 359 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 ADAM20O43506 726 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 SYT7O43581 403 aa6.39□□□□□ -1.39
HMGB3P1-201ENST00000393368 WBP4O75554 376 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms