RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 WDSUB1Q8N9V3 476 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 TIMD4Q96H15 378 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 PRSS27Q9BQR3 290 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 FZR1Q9UM11 496 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 OR2B11Q5JQS5 317 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 BRICD5Q6PL45 260 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 CXorf67Q86X51 503 aaPredicted RBP14.74□□□□□ -0.05
SCN3B-202ENST00000392770 OR52N4Q8NGI2 321 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 SF3B5Q9BWJ5 86 aaKnown RBP14.74□□□□□ -0.05
SCN3B-202ENST00000392770 SUCNR1Q9BXA5 334 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 MN1Q10571 1320 aaPredicted RBP14.74□□□□□ -0.05
SCN3B-202ENST00000392770 IGHV1-45A0A0A0MS14 117 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 CTAG2O75638 210 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 GPR12P47775 334 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 FAM185AQ8N0U4 392 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 OR8B12Q8NGG6 310 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 CMBLQ96DG6 245 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 ZNF391Q9UJN7 358 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 KITLGP21583 273 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 OR2T2Q6IF00 324 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 CATSPERDQ86XM0 798 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 TAF9BQ9HBM6 251 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 EDARQ9UNE0 448 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 HLA-HP01893 362 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 SELENOPP49908 381 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 SCN5AQ14524 2016 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 ISXQ2M1V0 245 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 SCARB1Q8WTV0 552 aa14.74□□□□□ -0.05
SCN3B-202ENST00000392770 TINAGL1Q9GZM7 467 aaPredicted RBP14.74□□□□□ -0.05
SCN3B-202ENST00000392770 B4E171 279 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 PTP4A3O75365 173 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 LYZL6O75951 148 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 SNAPINO95295 136 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 TSPAN7P41732 249 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 ZNF83P51522 516 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 PIGPP57054 158 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 MRPS34P82930 218 aaKnown RBP14.73□□□□□ -0.05
SCN3B-202ENST00000392770 PDCD1Q15116 288 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 HSD17B11Q8NBQ5 300 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 GPX8Q8TED1 209 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 LIN37Q96GY3 246 aaPredicted RBP14.73□□□□□ -0.05
SCN3B-202ENST00000392770 CNTD2Q9H8S5 307 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 THSD7BQ9C0I4 1608 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 H3BMH7 237 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 CYC1P08574 325 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 SNRNP70P08621 437 aaKnown RBP14.73□□□□□ -0.05
SCN3B-202ENST00000392770 PTGFRP43088 359 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 DBPQ10586 325 aaPredicted RBP14.73□□□□□ -0.05
SCN3B-202ENST00000392770 PRDX4Q13162 271 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 ZNF468Q5VIY5 522 aaPredicted RBP14.73□□□□□ -0.05
SCN3B-202ENST00000392770 TSEN54Q7Z6J9 526 aaKnown RBP14.73□□□□□ -0.05
SCN3B-202ENST00000392770 DNASE2BQ8WZ79 361 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 TIMM8BQ9Y5J9 83 aaPredicted RBP14.73□□□□□ -0.05
SCN3B-202ENST00000392770 SPRY3O43610 288 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 CRYZL1O95825 349 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 SMIM10L1P0DMW3 83 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 AVPR2P30518 371 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 RAB4BP61018 213 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 FBXL14Q8N1E6 418 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 ST8SIA4Q92187 359 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 SMIM10Q96HG1 83 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 ARHGAP5-AS1Q96IT6 56 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 WDR1O75083 606 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 SMIM21Q3B7S5 101 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 TMEM268Q5VZI3 342 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 TMPRSS7Q7RTY8 843 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 FN3KRPQ9HA64 309 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 HEYLQ9NQ87 328 aaPredicted RBP14.73□□□□□ -0.05
SCN3B-202ENST00000392770 TET1Q8NFU7 2136 aa14.73□□□□□ -0.05
SCN3B-202ENST00000392770 PYCARD-AS1I3L0S3 204 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 CDC14BO60729 498 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 TGM1P22735 817 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 CA6P23280 308 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 LTBRP36941 435 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 TUSC5Q8IXB3 177 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 ZPLD1Q8TCW7 415 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 EXTL1Q92935 676 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 ST8SIA3O43173 380 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 OR2M7Q8NG81 312 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 OR13C8Q8NGS7 320 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 WFDC6Q9BQY6 131 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 KCNK15Q9H427 330 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 CELA2AP08217 269 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 CD82P27701 267 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 ALDH3B1P43353 468 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 CST9LP1Q5W188 147 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 OR8G2PQ6IF36 304 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 ADPRHL1Q8NDY3 354 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 OR2Z1Q8NG97 314 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 ZNF230Q9UIE0 474 aaPredicted RBP14.72□□□□□ -0.05
SCN3B-202ENST00000392770 A0A1W2PR77 199 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 EFEMP2O95967 443 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 OR2AK2Q8NG84 335 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 RIMS4Q9H426 269 aaPredicted RBP14.72□□□□□ -0.05
SCN3B-202ENST00000392770 OR5H14A6NHG9 310 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 APOA2P02652 100 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 USF2Q15853 346 aaPredicted RBP14.72□□□□□ -0.05
SCN3B-202ENST00000392770 VWCEQ96DN2 955 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 MALSU1Q96EH3 234 aa14.72□□□□□ -0.05
SCN3B-202ENST00000392770 UCN2Q96RP3 112 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms