RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CCL2P13500 99 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 FOXF2Q12947 444 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 FAM189A2Q15884 450 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 GABRA6Q16445 453 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 MOGAT2Q3SYC2 334 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 RSBN1Q5VWQ0 802 aaPredicted RBP9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 OLFML2AQ68BL7 652 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZNF324BQ6AW86 544 aaPredicted RBP9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 SEM1Q6ZVN7 128 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 GPX8Q8TED1 209 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 UBASH3BQ8TF42 649 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 NPRL2Q8WTW4 380 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 HRASLSQ9HDD0 168 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 LUZP4Q9P127 313 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZNF816-ZNF321PA0A0X1KG74 233 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 CDC14BO60729 498 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 RAD51DO75771 328 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 NRASP01111 189 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 MT-ND4P03905 459 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 CRHP06850 196 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 UCNP55089 124 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 TMPRSS3P57727 454 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 MALLQ13021 153 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 GK2Q14410 553 aaPredicted RBP9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 EIF2S3LQ2VIR3 472 aaKnown RBP9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 RTL6Q6ICC9 239 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 CDH24Q86UP0 819 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 ACBD4Q8NC06 268 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 EXTL1Q92935 676 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 PIGTQ969N2 578 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 GAL3ST1Q99999 423 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 OPA3Q9H6K4 179 aa9.91□□□□□ -0.82
SMARCAL1-203ENST00000392128 MGAQ8IWI9 3026 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 A0A0B4J293 547 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 FIGNL2A6NMB9 653 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 LYZL6O75951 148 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 CGAP01215 116 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 LPLP06858 475 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 CHRM2P08172 466 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 CSF1P09603 554 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 UBE2NP61088 152 aaKnown RBP9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 BTG1P62324 171 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 DMRTC1Q5HYR2 192 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 LHFPL2Q6ZUX7 228 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 GABRG1Q8N1C3 465 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 TMEM104Q8NE00 496 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 SLC30A7Q8NEW0 376 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 TNFAIP8L1Q8WVP5 186 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 AQP3Q92482 292 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 MS4A3Q96HJ5 214 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 TMEM59Q9BXS4 323 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 CST11Q9H112 138 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 LPAR5Q9H1C0 372 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 MRPL15Q9P015 296 aaKnown RBP9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 KCNN3Q9UGI6 736 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 FAM215AQ9Y5M1 114 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 NUBP2Q9Y5Y2 271 aa9.9□□□□□ -0.82
SMARCAL1-203ENST00000392128 ANKRD11Q6UB99 2663 aaPredicted RBP9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 J3QW42 95 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 TCRBP04435 133 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 TPOP07202 933 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 ZNF14P17017 642 aaPredicted RBP9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 GIFP27352 417 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 MTCP1P56278 107 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 PER3P56645 1201 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 PRSS12P56730 875 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 ACTBP60709 375 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 ZP1P60852 638 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 ACTG1P63261 375 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 GUCA2AQ02747 115 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 CARTPTQ16568 116 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 TATDN3Q17R31 274 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 ZNF260Q3ZCT1 412 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 C1orf185Q5T7R7 199 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 OR5D18Q8NGL1 313 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 OR10R2Q8NGX6 335 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 STARD4Q96DR4 205 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 SEH1LQ96EE3 360 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 CACNG6Q9BXT2 260 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 PROCRQ9UNN8 238 aa9.9□□□□□ -0.83
SMARCAL1-203ENST00000392128 INTS1Q8N201 2190 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 SVILO95425 2214 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 WIPF3A6NGB9 483 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 INMT-MINDY4F8WBC2 141 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 TOXO94900 526 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 MPIG6BO95866 241 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 MELTFP08582 738 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 TRAPPC2P0DI81 140 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 TRAPPC2BP0DI82 140 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 WNT5AP41221 380 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 RBP2P50120 134 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 TBC1D28Q2M2D7 210 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 PCGF3Q3KNV8 242 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 SLC22A6Q4U2R8 563 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 MRPL21Q7Z2W9 205 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 C1QL2Q7Z5L3 287 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 AKAP14Q86UN6 197 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 CD163Q86VB7 1156 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 Q8NA96 180 aa9.89□□□□□ -0.83
SMARCAL1-203ENST00000392128 FAM57AQ8TBR7 257 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms