RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 APOBEC3DQ96AK3 386 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-1009P-201ENST00000390996 SLC41A3Q96GZ6 507 aa-0.3□□□□□ -2.46
RNU6-1009P-201ENST00000390996 NAA38Q9BRA0 125 aaKnown RBP-0.3□□□□□ -2.46
RNU6-1009P-201ENST00000390996 OR51M1Q9H341 326 aa-0.3□□□□□ -2.46
RNU6-1009P-201ENST00000390996 TMEM38BQ9NVV0 291 aa-0.3□□□□□ -2.46
RNU6-1009P-201ENST00000390996 SYNE1Q8NF91 8797 aaKnown RBP-0.3□□□□□ -2.46
RNU6-1009P-201ENST00000390996 MUC21A0A0G2JKD1 596 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 MUC21A0A140T8X8 626 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 OR52A4PA6NMU1 304 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 RAB29O14966 203 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PGA4P0DJD7 388 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PGA3P0DJD8 388 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 GGT2P36268 569 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 NAA10P41227 235 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 ACAA2P42765 397 aaKnown RBP-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 DDX39BQ13838 428 aaKnown RBP-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 KDM4DQ6B0I6 523 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 EMC6Q9BV81 110 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 UXTQ9UBK9 157 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 ODF2LQ9ULJ1 636 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 ROS1P08922 2347 aa-0.31□□□□□ -2.46
RNU6-1009P-201ENST00000390996 GPRASP1Q5JY77 1395 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 LOXHD1Q8IVV2 1947 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 IGKV1D-37A0A075B6S9 117 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 A0A1W2PQL4 384 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PCP4L1A6NKN8 68 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 SEC11BP0C7V7 166 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 CSNK2A2P19784 350 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 TEAD1P28347 426 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 MYCNOSP40205 109 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 TPMTP51580 245 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 ACLYP53396 1101 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 TPTE2P1Q5T6R2 138 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 TMEM236Q5W0B7 351 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 CYHR1Q6ZMK1 362 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 HS3ST5Q8IZT8 346 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 TEAD3Q99594 435 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 SFXN3Q9BWM7 321 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 TBL1XR1Q9BZK7 514 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 SLC39A1Q9NY26 324 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 HSPE1-MOB4S4R3N1 261 aa-0.32□□□□□ -2.46
RNU6-1009P-201ENST00000390996 K7EPI3 171 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 SLC19A2O60779 497 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 IGKV1D-33P01593 117 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 IGKV1-33P01594 117 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 OPN1SWP03999 348 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 GPX1P07203 203 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 USF1P22415 310 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 VPS26BQ4G0F5 336 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 CCDC152Q4G0S7 254 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 OR10W1Q8NGF6 305 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 FAM57AQ8TBR7 257 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 B9D2Q9BPU9 175 aa-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 ROPN1BQ9BZX4 212 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-1009P-201ENST00000390996 ELP1O95163 1332 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 ODF3BA8MYP8 253 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 GABRPO00591 440 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PSPHP1O15172 72 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 MAGEB3O15480 346 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 HPRT1P00492 218 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 MCF2P10911 925 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PTHLHP12272 177 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 HOXB8P17481 243 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 MYL9P24844 172 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PBLDP30039 288 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PRSS3P35030 304 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 TUFMP49411 452 aaKnown RBP-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PSMD5Q16401 504 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 CTSL3PQ5NE16 218 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PPM1LQ5SGD2 360 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 ZYG11AQ6WRX3 759 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 OR2M7Q8NG81 312 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 ZNF251Q9BRH9 671 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 SLC39A3Q9BRY0 314 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 CCDC59Q9P031 241 aaKnown RBP-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 SLIT2O94813 1529 aa-0.34□□□□□ -2.46
RNU6-1009P-201ENST00000390996 PXDNLA1KZ92 1463 aa-0.35□□□□□ -2.46
RNU6-1009P-201ENST00000390996 DMBT1Q9UGM3 2413 aaPredicted RBP-0.35□□□□□ -2.46
RNU6-1009P-201ENST00000390996 TRGV2A0A075B6R0 118 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 C17orf98A8MV24 154 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 A8MWP4 228 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 ETHE1O95571 254 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 GNRHRP30968 328 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 PPICP45877 212 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 BST2Q10589 180 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 SFXN5Q8TD22 340 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 RSPH1Q8WYR4 309 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 ISG20Q96AZ6 181 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 SGTBQ96EQ0 304 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 ALS2CR12Q96Q35 445 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 API5Q9BZZ5 524 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 MRM3Q9HC36 420 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 SNX6Q9UNH7 406 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 STARD10Q9Y365 291 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 SYNE2Q8WXH0 6885 aaKnown RBP-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 USP47Q96K76 1375 aa-0.35□□□□□ -2.47
RNU6-1009P-201ENST00000390996 IGHV6-1A0A0B4J1U7 121 aa-0.36□□□□□ -2.47
RNU6-1009P-201ENST00000390996 A0A0G2JMP0 313 aa-0.36□□□□□ -2.47
RNU6-1009P-201ENST00000390996 A0A0X1KG70 313 aa-0.36□□□□□ -2.47
RNU6-1009P-201ENST00000390996 H3BMM0 161 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms