RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 METTL11BQ5VVY1 283 aa21.88■■□□□ 1.09
SHOX2-201ENST00000389589 FJX1Q86VR8 437 aa21.88■■□□□ 1.09
SHOX2-201ENST00000389589 OR8S1Q8NH09 359 aa21.88■■□□□ 1.09
SHOX2-201ENST00000389589 TECTBQ96PL2 329 aa21.88■■□□□ 1.09
SHOX2-201ENST00000389589 NICN1Q9BSH3 213 aa21.88■■□□□ 1.09
SHOX2-201ENST00000389589 BANF2Q9H503 90 aa21.88■■□□□ 1.09
SHOX2-201ENST00000389589 KLK13Q9UKR3 277 aa21.88■■□□□ 1.09
SHOX2-201ENST00000389589 ELF5Q9UKW6 265 aaPredicted RBP21.88■■□□□ 1.09
SHOX2-201ENST00000389589 RPS27AP62979 156 aaKnown RBP21.87■■□□□ 1.09
SHOX2-201ENST00000389589 STEAP2Q8NFT2 490 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 OR4D10Q8NGI6 311 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 OR5D18Q8NGL1 313 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 NANOS1Q8WY41 292 aaKnown RBP21.87■■□□□ 1.09
SHOX2-201ENST00000389589 DACT3Q96B18 629 aaPredicted RBP21.87■■□□□ 1.09
SHOX2-201ENST00000389589 MED30Q96HR3 178 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 PLSCR2Q9NRY7 297 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 ZNF736B4DX44 427 aaPredicted RBP21.87■■□□□ 1.09
SHOX2-201ENST00000389589 KLK10O43240 276 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 RAB3DO95716 219 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 NRASP01111 189 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 CD74P04233 296 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 MTCP1P56278 107 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 FCN2Q15485 313 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 ST3GAL2Q16842 350 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 DMRTC1Q5HYR2 192 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 LHFPL2Q6ZUX7 228 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 TRAPPC6BQ86SZ2 158 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 NOXA1Q86UR1 476 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 RAB3CQ96E17 227 aa21.87■■□□□ 1.09
SHOX2-201ENST00000389589 ZNF486Q96H40 463 aaPredicted RBP21.87■■□□□ 1.09
SHOX2-201ENST00000389589 A0A0A6YYD4 124 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 IL18BPO95998 194 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 GNB3P16520 340 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 FAM89BQ8N5H3 189 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 BCL2L2Q92843 193 aaPredicted RBP21.86■■□□□ 1.09
SHOX2-201ENST00000389589 DVL3Q92997 716 aaPredicted RBP21.86■■□□□ 1.09
SHOX2-201ENST00000389589 APOBEC3DQ96AK3 386 aaPredicted RBP21.86■■□□□ 1.09
SHOX2-201ENST00000389589 TRIB1Q96RU8 372 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 GINS4Q9BRT9 223 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 ZNF816-ZNF321PA0A0X1KG74 233 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 C5orf49A4QMS7 147 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 ZNF503-AS2A6NEH8 195 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 C1QL2Q7Z5L3 287 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 OR51S1Q8NGJ8 323 aa21.86■■□□□ 1.09
SHOX2-201ENST00000389589 TRAF4Q9BUZ4 470 aaPredicted RBP21.86■■□□□ 1.09
SHOX2-201ENST00000389589 URB1O60287 2271 aaKnown RBP21.85■■□□□ 1.09
SHOX2-201ENST00000389589 IL5P05113 134 aa21.85■■□□□ 1.09
SHOX2-201ENST00000389589 MEF2DQ14814 521 aa21.85■■□□□ 1.09
SHOX2-201ENST00000389589 PNLIPRP3Q17RR3 467 aa21.85■■□□□ 1.09
SHOX2-201ENST00000389589 NPDC1Q9NQX5 325 aaPredicted RBP21.85■■□□□ 1.09
SHOX2-201ENST00000389589 KCNN3Q9UGI6 736 aa21.85■■□□□ 1.09
SHOX2-201ENST00000389589 A0A1W2PP11 408 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 SERPINA5P05154 406 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 HIST1H1DP16402 221 aaKnown RBP21.84■■□□□ 1.09
SHOX2-201ENST00000389589 MGMTP16455 207 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 CCNOP22674 350 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 RBP2P50120 134 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 ZP1P60852 638 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 MALLQ13021 153 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 GLDNQ6ZMI3 551 aaPredicted RBP21.84■■□□□ 1.09
SHOX2-201ENST00000389589 OR51T1Q8NGJ9 327 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 BORCS8Q96FH0 119 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 POM121L2Q96KW2 1035 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 BEX1Q9HBH7 125 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 GPN1Q9HCN4 374 aaPredicted RBP21.84■■□□□ 1.09
SHOX2-201ENST00000389589 SLC7A11Q9UPY5 501 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 SOCS1O15524 211 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 GNG2P59768 71 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 FAM214BQ7L5A3 538 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 LIX1LQ8IVB5 337 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 BEST4Q8NFU0 473 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 SNIP1Q8TAD8 396 aaKnown RBP21.84■■□□□ 1.09
SHOX2-201ENST00000389589 TM2D1Q9BX74 207 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 IFT46Q9NQC8 304 aa21.84■■□□□ 1.09
SHOX2-201ENST00000389589 DOCK7Q96N67 2140 aa21.83■■□□□ 1.09
SHOX2-201ENST00000389589 SSNA1O43805 119 aa21.83■■□□□ 1.09
SHOX2-201ENST00000389589 C1QBP02746 253 aa21.83■■□□□ 1.09
SHOX2-201ENST00000389589 FCER2P06734 321 aa21.83■■□□□ 1.09
SHOX2-201ENST00000389589 SDHBP21912 280 aa21.83■■□□□ 1.09
SHOX2-201ENST00000389589 FUT6P51993 359 aa21.83■■□□□ 1.09
SHOX2-201ENST00000389589 NUDCD2Q8WVJ2 157 aa21.83■■□□□ 1.09
SHOX2-201ENST00000389589 REPIN1Q9BWE0 567 aaKnown RBP21.83■■□□□ 1.09
SHOX2-201ENST00000389589 METTL9Q9H1A3 318 aa21.83■■□□□ 1.09
SHOX2-201ENST00000389589 FAM230AA0A1W2PPH8 454 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 TMEM225BP0DP42 221 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 SERPINA2P20848 420 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 ARL6IP1Q15041 203 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 GUSBP1Q15486 140 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 HIKESHIQ53FT3 197 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 PLAC9Q5JTB6 97 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 TFAP2EQ6VUC0 442 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 OR11H7Q8NGC8 314 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 WNT2BQ93097 391 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 SLC25A21Q9BQT8 299 aaPredicted RBP21.83■■□□□ 1.08
SHOX2-201ENST00000389589 OPA3Q9H6K4 179 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 ELL3Q9HB65 397 aaPredicted RBP21.83■■□□□ 1.08
SHOX2-201ENST00000389589 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.83■■□□□ 1.08
SHOX2-201ENST00000389589 SCP2D1Q9UJQ7 156 aa21.83■■□□□ 1.08
SHOX2-201ENST00000389589 PYCARD-AS1I3L0S3 204 aa21.82■■□□□ 1.08
SHOX2-201ENST00000389589 HPXP02790 462 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms