RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 NECAP1Q8NC96 275 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 CIRBP-AS1Q8TBR5 109 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 UBE2E2Q96LR5 201 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 TSNAXQ99598 290 aaKnown RBP3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 CHCHD7Q9BUK0 85 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 VCX3AQ9NNX9 186 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 C21orf62Q9NYP8 219 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 GGA2Q9UJY4 613 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 SIGLEC9Q9Y336 463 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 ARID1AO14497 2285 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 DOCK8Q8NF50 2099 aa3.24□□□□□ -1.89
RNU6-40P-201ENST00000384254 IGKV1-27A0A075B6S5 117 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 A0A0A6YYD5 115 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 IGHV3-72A0A0B4J1Y9 119 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 ZNF850A8MQ14 1090 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 CENPBD1B2RD01 187 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 SEC14L6B5MCN3 397 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 LINC01619G3V211 115 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 NDUFS8O00217 210 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 PSPHP1O15172 72 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 RRP8O43159 456 aaKnown RBP3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 SPOPO43791 374 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 IGLV3-25P01717 112 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 TRBV12-3P01733 135 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 LOXP28300 417 aaPredicted RBP3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 PRLHRP49683 370 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 MTPNP58546 118 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 INCA1Q0VD86 236 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 ZNF816Q0VGE8 651 aaPredicted RBP3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 DMC1Q14565 340 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 C6orf99Q4VX62 202 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 C6orf183Q5T699 404 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 STEAP4Q687X5 459 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 SLC7A5P1Q8MH63 180 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 TRIML2Q8N7C3 387 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 OR5T1Q8NG75 326 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 SFXN5Q8TD22 340 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 CENPNQ96H22 339 aaPredicted RBP3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 NUDT9Q9BW91 350 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 ARV1Q9H2C2 271 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 ZNF442Q9H7R0 627 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 HEBP1Q9NRV9 189 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 SIGLEC7Q9Y286 467 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 CBY1Q9Y3M2 126 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 KLF12Q9Y4X4 402 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 LRRC42Q9Y546 428 aa3.23□□□□□ -1.89
RNU6-40P-201ENST00000384254 E7EWF7 191 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 TRAPPC6AO75865 159 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 SCO1O75880 301 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 RCBTB2O95199 551 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 SMC2O95347 1197 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 CYB5R3P00387 301 aaPredicted RBP3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 CXCR1P25024 350 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 TMEM236Q5W0B7 351 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 DRAM1Q8N682 238 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 OR4M2Q8NGB6 313 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 OR51A7Q8NH64 312 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 OR1L1Q8NH94 360 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 RTN4IP1Q8WWV3 396 aaPredicted RBP3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 LRRC39Q96DD0 335 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 SNF8Q96H20 258 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 ALS2CR12Q96Q35 445 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 SIKE1Q9BRV8 207 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 OR51B5Q9H339 312 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 XKR8Q9H6D3 395 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 RBFOX1Q9NWB1 397 aaKnown RBP3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 RAB23Q9ULC3 237 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 ZNF835Q9Y2P0 537 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 V9GYY9 64 aa3.22□□□□□ -1.89
RNU6-40P-201ENST00000384254 TNS2Q63HR2 1409 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 LRCOL1A6NCL2 159 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 PRB2P02812 416 aaPredicted RBP3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 RPN2P04844 631 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 MMP7P09237 267 aaPredicted RBP3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 PRSS3P35030 304 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 PSMB2P49721 201 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 IGFL3Q6UXB1 125 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 ASCL4Q6XD76 172 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 NEGR1Q7Z3B1 354 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 ZFAND1Q8TCF1 268 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 ESR2Q92731 530 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 FAM19A4Q96LR4 140 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 NAPGQ99747 312 aaPredicted RBP3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 TIMM29Q9BSF4 260 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 HAUS4Q9H6D7 363 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 ANKHQ9HCJ1 492 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 TMEM100Q9NV29 134 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 STK38LQ9Y2H1 464 aa3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 BRCA1P38398 1863 aaKnown RBP3.21□□□□□ -1.9
RNU6-40P-201ENST00000384254 NPHP4O75161 1426 aaPredicted RBP3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 TSPOAP1O95153 1857 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 IGLV3-12A0A075B6K2 115 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 IGHV2OR16-5A0A0B4J2B6 119 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 RFXANKO14593 260 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 PRMT5O14744 637 aaPredicted RBP3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 RBBP9O75884 186 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 ZNF286BP0CG31 522 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 CCNOP22674 350 aa3.2□□□□□ -1.9
RNU6-40P-201ENST00000384254 PRKACBP22694 351 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms