RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 SYNPRQ8TBG9 265 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 SLC25A38Q96DW6 304 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 LOC100289279A0A1B0GTE1 492 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 LILRA1O75019 489 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 CRYAAP02489 173 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 TALDO1P37837 337 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 PRDX4Q13162 271 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 CDSNQ15517 529 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 ANGPTL5Q86XS5 388 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 CDH26Q8IXH8 852 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 LILRB4Q8NHJ6 448 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 SSC4DQ8WTU2 575 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 CA5BP1Q8WTZ4 195 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 PRR14LQ5THK1 2151 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 THBDP07204 575 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 IL18Q14116 193 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 ZNF79Q15937 498 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 C1QTNF12Q5T7M4 302 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 AWAT2Q6E213 333 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 FTMTQ8N4E7 242 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 SPSB1Q96BD6 273 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 BCL2L14Q9BZR8 327 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 OR10A4Q9H209 315 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 RELNP78509 3460 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 PCNX1Q96RV3 2341 aa23.04■■□□□ 1.28
MSX1-201ENST00000382723 NBASA2RRP1 2371 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 TMEM272A0A1B0GTI8 110 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 PRKACBP22694 351 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 CD40LGP29965 261 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 MPV17P39210 176 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 EFNB2P52799 333 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 ART1P52961 327 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 MTCP1P56278 107 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 KLF14Q8TD94 323 aaPredicted RBP23.03■■□□□ 1.28
MSX1-201ENST00000382723 MARS2Q96GW9 593 aaKnown RBP23.03■■□□□ 1.28
MSX1-201ENST00000382723 WFIKKN1Q96NZ8 548 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 SLC7A11Q9UPY5 501 aa23.03■■□□□ 1.28
MSX1-201ENST00000382723 MRPS28Q9Y2Q9 187 aaKnown RBP23.03■■□□□ 1.28
MSX1-201ENST00000382723 SCAND1P57086 179 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 SNTB1Q13884 538 aaKnown RBP23.02■■□□□ 1.28
MSX1-201ENST00000382723 OR10K2Q6IF99 312 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 CRIP3Q6Q6R5 217 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 PNLDC1Q8NA58 520 aaKnown RBP23.02■■□□□ 1.28
MSX1-201ENST00000382723 DVL3Q92997 716 aaPredicted RBP23.02■■□□□ 1.28
MSX1-201ENST00000382723 BORCS8Q96FH0 119 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 BBC3Q96PG8 261 aaPredicted RBP23.02■■□□□ 1.28
MSX1-201ENST00000382723 RHBDL2Q9NX52 303 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 FZR1Q9UM11 496 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 ANKRD30BLA7E2S9 258 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 CST4P01036 141 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 RAC2P15153 192 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 RIN1Q13671 783 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 GLIPR1L1Q6UWM5 242 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 RADILQ96JH8 1075 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 CMTM3Q96MX0 182 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 NEK6Q9HC98 313 aa23.02■■□□□ 1.28
MSX1-201ENST00000382723 PRB1P04280 392 aa23.01■■□□□ 1.27
MSX1-201ENST00000382723 CD40P25942 277 aa23.01■■□□□ 1.27
MSX1-201ENST00000382723 PSG7Q13046 419 aa23.01■■□□□ 1.27
MSX1-201ENST00000382723 PYDC2Q56P42 97 aa23.01■■□□□ 1.27
MSX1-201ENST00000382723 ZDHHC23Q8IYP9 409 aa23.01■■□□□ 1.27
MSX1-201ENST00000382723 IZUMO1Q8IYV9 350 aa23.01■■□□□ 1.27
MSX1-201ENST00000382723 RNASE6Q93091 150 aaKnown RBP23.01■■□□□ 1.27
MSX1-201ENST00000382723 SOSTQ9BQB4 213 aa23.01■■□□□ 1.27
MSX1-201ENST00000382723 IGKV1-27A0A075B6S5 117 aa23■■□□□ 1.27
MSX1-201ENST00000382723 RBP2P50120 134 aa23■■□□□ 1.27
MSX1-201ENST00000382723 FABP6P51161 128 aa23■■□□□ 1.27
MSX1-201ENST00000382723 SNTB2Q13425 540 aaKnown RBP23■■□□□ 1.27
MSX1-201ENST00000382723 ALKBH6Q3KRA9 238 aa23■■□□□ 1.27
MSX1-201ENST00000382723 FBXL19-AS1Q494R0 122 aa23■■□□□ 1.27
MSX1-201ENST00000382723 HAVCR1Q96D42 359 aa23■■□□□ 1.27
MSX1-201ENST00000382723 TECTBQ96PL2 329 aa23■■□□□ 1.27
MSX1-201ENST00000382723 SDHCQ99643 169 aaPredicted RBP23■■□□□ 1.27
MSX1-201ENST00000382723 GAL3ST1Q99999 423 aa23■■□□□ 1.27
MSX1-201ENST00000382723 ABCG5Q9H222 651 aa23■■□□□ 1.27
MSX1-201ENST00000382723 A0A0G2JMP0 313 aa23■■□□□ 1.27
MSX1-201ENST00000382723 A0A0X1KG70 313 aa23■■□□□ 1.27
MSX1-201ENST00000382723 PPP3CBP16298 524 aa23■■□□□ 1.27
MSX1-201ENST00000382723 CA6P23280 308 aa23■■□□□ 1.27
MSX1-201ENST00000382723 GRNP28799 593 aaKnown RBP23■■□□□ 1.27
MSX1-201ENST00000382723 FUT6P51993 359 aa23■■□□□ 1.27
MSX1-201ENST00000382723 XKRXQ6PP77 449 aa23■■□□□ 1.27
MSX1-201ENST00000382723 METAP1DQ6UB28 335 aaPredicted RBP23■■□□□ 1.27
MSX1-201ENST00000382723 LHFPL2Q6ZUX7 228 aa23■■□□□ 1.27
MSX1-201ENST00000382723 OR4M2Q8NGB6 313 aa23■■□□□ 1.27
MSX1-201ENST00000382723 TNFAIP8L1Q8WVP5 186 aa23■■□□□ 1.27
MSX1-201ENST00000382723 ITFG2Q969R8 447 aa23■■□□□ 1.27
MSX1-201ENST00000382723 S100A16Q96FQ6 103 aaKnown RBP23■■□□□ 1.27
MSX1-201ENST00000382723 SRRQ9GZT4 340 aa23■■□□□ 1.27
MSX1-201ENST00000382723 KCNJ16Q9NPI9 418 aa23■■□□□ 1.27
MSX1-201ENST00000382723 MRPS7Q9Y2R9 242 aaKnown RBP23■■□□□ 1.27
MSX1-201ENST00000382723 SPEF1Q9Y4P9 236 aa23■■□□□ 1.27
MSX1-201ENST00000382723 ATP6V1G2-DDX39BF2Z307 99 aa22.99■■□□□ 1.27
MSX1-201ENST00000382723 BPNT1O95861 308 aa22.99■■□□□ 1.27
MSX1-201ENST00000382723 PLATP00750 562 aa22.99■■□□□ 1.27
MSX1-201ENST00000382723 PTGFRP43088 359 aa22.99■■□□□ 1.27
MSX1-201ENST00000382723 C4orf17Q53FE4 359 aa22.99■■□□□ 1.27
MSX1-201ENST00000382723 TMEM255AQ5JRV8 349 aa22.99■■□□□ 1.27
MSX1-201ENST00000382723 TMEM108Q6UXF1 575 aa22.99■■□□□ 1.27
MSX1-201ENST00000382723 FAM46BQ96A09 425 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms