RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 ASB17Q8WXJ9 295 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 MS4A7Q9GZW8 240 aaPredicted RBP10.89□□□□□ -0.67
CIITA-202ENST00000381835 NELFAQ9H3P2 528 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 GPR35Q9HC97 309 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 TMEM138Q9NPI0 162 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 ASH2LQ9UBL3 628 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 CYB5R1Q9UHQ9 305 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 GLS2Q9UI32 602 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 LHFPL6Q9Y693 200 aa10.89□□□□□ -0.67
CIITA-202ENST00000381835 ITPR1Q14643 2758 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 H7C417 338 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 CSF1P09603 554 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 MSR1P21757 451 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 RIPPLY2Q5TAB7 128 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 C9orf135Q5VTT2 229 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 KCTD18Q6PI47 426 aaPredicted RBP10.88□□□□□ -0.67
CIITA-202ENST00000381835 C11orf88Q6PI97 169 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 DNM1P46Q6ZS02 220 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 KRT77Q7Z794 578 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 CD163Q86VB7 1156 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 PDZD9Q8IXQ8 264 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 C9orf106Q8NAJ2 232 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 KDF1Q8NAX2 398 aaPredicted RBP10.88□□□□□ -0.67
CIITA-202ENST00000381835 OR2AJ1Q8NGZ0 328 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 OR52N5Q8NH56 324 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 CPT1CQ8TCG5 803 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 GMPPAQ96IJ6 420 aaPredicted RBP10.88□□□□□ -0.67
CIITA-202ENST00000381835 ZNF416Q9BWM5 594 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 ELOVL3Q9HB03 270 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 CENPMQ9NSP4 180 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 TAS2R8Q9NYW2 309 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 UPB1Q9UBR1 384 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 MTFP1Q9UDX5 166 aa10.88□□□□□ -0.67
CIITA-202ENST00000381835 H3BSH0 61 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 FGF2P09038 288 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 B4GALT1P15291 398 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 ABOP16442 354 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 OR7E24Q6IFN5 339 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 ZNF679Q8IYX0 411 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 MUC20Q8N307 709 aaPredicted RBP10.87□□□□□ -0.67
CIITA-202ENST00000381835 BVESQ8NE79 360 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 OR4D10Q8NGI6 311 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 ST7LQ8TDW4 575 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 TNFAIP8L1Q8WVP5 186 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 NABP1Q96AH0 204 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 OR8B4Q96RC9 309 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 ASF1BQ9NVP2 202 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 STEAP1Q9UHE8 339 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 GDF2Q9UK05 429 aaPredicted RBP10.87□□□□□ -0.67
CIITA-202ENST00000381835 TRAV8-7A0A075B6U6 113 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 TRBV5-5A0A0J9YX44 114 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 ABHD16AO95870 558 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 GTF2F2P13984 249 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 TDGF1P3P51864 188 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 MRPS34P82930 218 aaKnown RBP10.87□□□□□ -0.67
CIITA-202ENST00000381835 KCNMB1Q16558 191 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 ODF4Q2M2E3 257 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 DCAF12L2Q5VW00 463 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 CFAP77Q6ZQR2 320 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 ZNF676Q8N7Q3 588 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 CNEP1R1Q8N9A8 125 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 WNT2BQ93097 391 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 FOXB1Q99853 325 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 LINC00470Q9BZP3 86 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 COMMD4Q9H0A8 199 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 C1orf198Q9H425 327 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 GP6Q9HCN6 339 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 GLRX2Q9NS18 164 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 PRSS50Q9UI38 385 aa10.87□□□□□ -0.67
CIITA-202ENST00000381835 MEIS3P1A6NDR6 274 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 ZNF587BE7ETH6 402 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 TOR1AO14656 332 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 RER1O15258 196 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 NUPL2O15504 423 aaKnown RBP10.86□□□□□ -0.67
CIITA-202ENST00000381835 SS18L1O75177 396 aaPredicted RBP10.86□□□□□ -0.67
CIITA-202ENST00000381835 FCER2P06734 321 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 AKAIN1P0CW23 69 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 LSM6P62312 80 aaKnown RBP10.86□□□□□ -0.67
CIITA-202ENST00000381835 GUCA2AQ02747 115 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 ZNF273Q14593 569 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 C4orf46Q504U0 113 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 NSUN5P2Q63ZY6 315 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 TFAP2EQ6VUC0 442 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 FOXL2NBQ6ZUU3 175 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 HSD17B13Q7Z5P4 300 aaPredicted RBP10.86□□□□□ -0.67
CIITA-202ENST00000381835 CDH26Q8IXH8 852 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 STPG2Q8N412 459 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 OR51S1Q8NGJ8 323 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 OR1S1Q8NH92 325 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 TMEM106AQ96A25 262 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 SLAMF6Q96DU3 332 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 TMEM38BQ9NVV0 291 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 LRP12Q9Y561 859 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 GGT3PA6NGU5 568 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 FIGNL2A6NMB9 653 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 SPDEFO95238 335 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 RIDAP52758 137 aaKnown RBP10.86□□□□□ -0.67
CIITA-202ENST00000381835 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
CIITA-202ENST00000381835 SCAND1P57086 179 aa10.86□□□□□ -0.67
CIITA-202ENST00000381835 SORDQ00796 357 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms