RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 GHRLQ9UBU3 117 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 APC2O95996 2303 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 CACNA1GO43497 2377 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 K7EM74 188 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 CHRM2P08172 466 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 AKAIN1P0CW23 69 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 MTCP1P56278 107 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 NHLH1Q02575 133 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 PLP2Q04941 152 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 CLVS2Q5SYC1 327 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 TMEM42Q69YG0 159 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 Q6ZS92 163 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 FAM214BQ7L5A3 538 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 ZNF584Q8IVC4 421 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 NUDT16L1Q9BRJ7 211 aaKnown RBP17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 SCNM1Q9BWG6 230 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 OR10A4Q9H209 315 aa17.21■□□□□ 0.35
PDLIM5-205ENST00000380180 ACACAQ13085 2346 aa17.21■□□□□ 0.34
PDLIM5-205ENST00000380180 NRASP01111 189 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 MELTFP08582 738 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 GNB3P16520 340 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 NKX2-5P52952 324 aaPredicted RBP17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 TFAP2EQ6VUC0 442 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 SPSB1Q96BD6 273 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 POM121L2Q96KW2 1035 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 DMRTB1Q96MA1 342 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 FYTTD1Q96QD9 318 aaKnown RBP17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 FAM230AA0A1W2PPH8 454 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 SOCS1O15524 211 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 CNN3Q15417 329 aaKnown RBP17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 GUSBP1Q15486 140 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 STEAP1BQ6NZ63 245 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 ZNF782Q6ZMW2 699 aaPredicted RBP17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 RTN4RL2Q86UN3 420 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 FJX1Q86VR8 437 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 GABRG1Q8N1C3 465 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 GIMAP1Q8WWP7 306 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 S100A13Q99584 98 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 CST11Q9H112 138 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 BEX1Q9HBH7 125 aa17.2■□□□□ 0.34
PDLIM5-205ENST00000380180 SPENQ96T58 3664 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-205ENST00000380180 PEX14O75381 377 aa17.19■□□□□ 0.34
PDLIM5-205ENST00000380180 PRKACBP22694 351 aa17.19■□□□□ 0.34
PDLIM5-205ENST00000380180 TAS2R19P59542 299 aa17.19■□□□□ 0.34
PDLIM5-205ENST00000380180 CBX3Q13185 183 aa17.19■□□□□ 0.34
PDLIM5-205ENST00000380180 RBMXL3Q8N7X1 1067 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-205ENST00000380180 C9orf106Q8NAJ2 232 aa17.19■□□□□ 0.34
PDLIM5-205ENST00000380180 TMEM229BQ8NBD8 167 aa17.19■□□□□ 0.34
PDLIM5-205ENST00000380180 OR10K1Q8NGX5 313 aa17.19■□□□□ 0.34
PDLIM5-205ENST00000380180 IGKV1-27A0A075B6S5 117 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 ARPC1BO15143 372 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 NDUFB6O95139 128 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 GK2Q14410 553 aaPredicted RBP17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 PLAC9Q5JTB6 97 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 DPPA2Q7Z7J5 298 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 CDH24Q86UP0 819 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 CNEP1R1Q8N9A8 125 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 BEST4Q8NFU0 473 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 PIGCQ92535 297 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 WNT2BQ93097 391 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 APOBEC3DQ96AK3 386 aaPredicted RBP17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 MS4A3Q96HJ5 214 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 URM1Q9BTM9 101 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 REPIN1Q9BWE0 567 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 OR51J1Q9H342 316 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 BOD1L1Q8NFC6 3051 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 ZNF816-ZNF321PA0A0X1KG74 233 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 AHRRA9YTQ3 701 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 ICMTO60725 284 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 CYB5AP00167 134 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 TMEM225BP0DP42 221 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 MGMTP16455 207 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 SERPINA2P20848 420 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 IGHV1-2P23083 117 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 RCVRNP35243 200 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 TMEM50BP56557 158 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 ZP1P60852 638 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 RPS27AP62979 156 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 FAM189A2Q15884 450 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 TRAPPC6BQ86SZ2 158 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 OR56B1Q8NGI3 324 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 NUDCD2Q8WVJ2 157 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 NANOS1Q8WY41 292 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 MED28Q9H204 178 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 ELL3Q9HB65 397 aaPredicted RBP17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 NEK6Q9HC98 313 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 SSUH2Q9Y2M2 353 aa17.18■□□□□ 0.34
PDLIM5-205ENST00000380180 NGFP01138 241 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 KIR2DL2P43627 348 aaPredicted RBP17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 RBP2P50120 134 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 ST3GAL2Q16842 350 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 ACSF3Q4G176 576 aaPredicted RBP17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 ZNF585AQ6P3V2 769 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 MDP1Q86V88 176 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 FAM89BQ8N5H3 189 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 OR51S1Q8NGJ8 323 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 OR51T1Q8NGJ9 327 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 RAB3CQ96E17 227 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 BORCS8Q96FH0 119 aa17.17■□□□□ 0.34
PDLIM5-205ENST00000380180 KCNK7Q9Y2U2 307 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms